RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 B3GALT5Q9Y2C3 310 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 RAI1Q7Z5J4 1906 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 PLPP3O14495 311 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 GOSR2O14653 212 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 TRAF3IP2O43734 574 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 CNOT4O95628 575 aaKnown RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 RPA2P15927 270 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SOX2P48431 317 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 LINC01590Q5TEZ4 76 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 LIPNQ5VXI9 398 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 LEG1Q6P5S2 330 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 CFAP77Q6ZQR2 320 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SLC16A9Q7RTY1 509 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 JAZF1Q86VZ6 243 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ADPRHL1Q8NDY3 354 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 OR1S1Q8NH92 325 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 RASD2Q96D21 266 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 WDR89Q96FK6 387 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 GPX7Q96SL4 187 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SLC19A3Q9BZV2 496 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 COMMD4Q9H0A8 199 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 PARPBPQ9NWS1 579 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 STEAP1Q9UHE8 339 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 MOKQ9UQ07 419 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 MAST4O15021 2626 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 TRBV5-5A0A0J9YX44 114 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 LOC102725191A0A1B0GVB3 256 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 GGT3PA6NGU5 568 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 UPK3AO75631 287 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 RAD51DO75771 328 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SIX6O95475 246 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ASAH2BP0C7U1 165 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 AKAIN1P0CW23 69 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 OR8G3PP0DMU2 310 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF43P17038 809 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ADRA2CP18825 462 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 RPS4XP62701 263 aaKnown RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ERVK-25P63136 954 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 PHYHD1Q5SRE7 291 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF660Q6AZW8 331 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ANKRD16Q6P6B7 361 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 LRRTM1Q86UE6 522 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 WFDC8Q8IUA0 241 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 MUC20Q8N307 709 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 STEAP2Q8NFT2 490 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 THRSPQ92748 146 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 PIK3IP1Q96FE7 263 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 ADAD1Q96M93 576 aaKnown RBP8.18□□□□□ -1.1
BRCA1-219ENST00000491747 EMC6Q9BV81 110 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 MFFQ9GZY8 342 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 SLCO5A1Q9H2Y9 848 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 FRRS1LQ9P0K9 344 aa8.18□□□□□ -1.1
BRCA1-219ENST00000491747 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 POLQO75417 2590 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 A0A1W2PR80 420 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 C11orf98E9PRG8 122 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 LGALS8O00214 317 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 MT-ATP6P00846 226 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 MAS1P04201 325 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 GTF2F2P13984 249 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 SLC25A1P53007 311 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 SSBP1Q04837 148 aaKnown RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 GABRA6Q16445 453 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 C4orf46Q504U0 113 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 OR52H1Q8NGJ2 320 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 CCDC107Q8WV48 283 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM106AQ96A25 262 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 Q96M85 177 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 PLEKHF2Q9H8W4 249 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 FKRPQ9H9S5 495 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 FANCFQ9NPI8 374 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 MED29Q9NX70 200 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 UPB1Q9UBR1 384 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM212A6NML5 194 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 FAM171A2A8MVW0 826 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 PRR32B1ATL7 298 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 IMPA2O14732 288 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF254O75437 659 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 SPDEFO95238 335 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 PLAUP00749 431 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 APEHP13798 732 aaKnown RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 POU3F1Q03052 451 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 STK11Q15831 433 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 OR7E24Q6IFN5 339 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 UEVLDQ8IX04 471 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF676Q8N7Q3 588 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF511Q8NB15 262 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 OR51S1Q8NGJ8 323 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 GPR148Q8TDV2 347 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF837Q96EG3 531 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 MS4A7Q9GZW8 240 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 DNTTIP1Q9H147 329 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 ALX4Q9H161 411 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 IFT46Q9NQC8 304 aa8.17□□□□□ -1.1
BRCA1-219ENST00000491747 MRM2Q9UI43 246 aaKnown RBP8.17□□□□□ -1.1
BRCA1-219ENST00000491747 IKZF2Q9UKS7 526 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms