RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 LGALS8O00214 317 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 XPNPEP2O43895 674 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ISG15P05161 165 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 GBX2P52951 348 aaPredicted RBP13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HOXA4Q00056 320 aaPredicted RBP13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 FAM76BQ5HYJ3 339 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 WDR82Q6UXN9 313 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 IZUMO2Q6UXV1 221 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TMPRSS11AQ6ZMR5 421 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 RDH10Q8IZV5 341 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 C19orf18Q8NEA5 215 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 BPIFB6Q8NFQ5 453 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 RPL3LQ92901 407 aaKnown RBP13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 C10orf35Q96D05 121 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 METTL17Q9H7H0 456 aaPredicted RBP13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TRIM36Q9NQ86 728 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PLCXD1Q9NUJ7 323 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ABCA2Q9BZC7 2435 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CSPG4Q6UVK1 2322 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TRAV20A0A0B4J274 112 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR4C45A6NMZ5 311 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CDIPTO14735 213 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 LHBP01229 141 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CCDC159P0C7I6 412 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 RPS2P15880 293 aaKnown RBP13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 EGR1P18146 543 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CPT2P23786 658 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CFHR2P36980 270 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HSPA13P48723 471 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TGM4P49221 684 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ST3GAL4Q11206 333 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 KCNJ8Q15842 424 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 DMRTC1Q5HYR2 192 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SFRP4Q6FHJ7 346 aaPredicted RBP13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ZNF676Q8N7Q3 588 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SCCPDHQ8NBX0 429 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 DEFB108BQ8NET1 73 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CHCHD3Q9NX63 227 aaKnown RBP13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 MIOXQ9UGB7 285 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PSORS1C1Q9UIG5 152 aa13.63□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TRAV38-1A0A0B4J264 116 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ANKRD61A6NGH8 418 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OOEPA6NGQ2 149 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TMEM212A6NML5 194 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 E9PI62 339 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 C3orf80F5H4A9 247 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PLPP2O43688 288 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CRLF1O75462 422 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 FOXH1O75593 365 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HOXB4P17483 251 aaPredicted RBP13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PCMT1P22061 227 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ESCO2Q56NI9 601 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR2G6Q5TZ20 316 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 DCDC5Q6ZRR9 648 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 AHSA2Q719I0 299 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 STX19Q8N4C7 294 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR10Z1Q8NGY1 313 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 NEIL1Q96FI4 390 aaPredicted RBP13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ANKRD60Q9BZ19 345 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 COMMD4Q9H0A8 199 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR51I2Q9H344 312 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 LPAR3Q9UBY5 353 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CDC42EP3Q9UKI2 254 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 LRCH1Q9Y2L9 728 aa13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 RRP15Q9Y3B9 282 aaKnown RBP13.62□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 HIVEP2P31629 2446 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SRRM5B3KS81 715 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 GATBO75879 557 aaKnown RBP13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 WNT2P09544 360 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ZNF20P17024 532 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 MYF6P23409 242 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SEC61A1P61619 476 aaKnown RBP13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 LCN2P80188 198 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CR1LQ2VPA4 569 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 C6orf141Q5SZD1 244 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TEX36Q5VZQ5 186 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 NLRC3Q7RTR2 1065 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR8B3Q8NGG8 313 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR13C3Q8NGS6 347 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR10AC1Q8NH08 325 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR52N1Q8NH53 320 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR5AK2Q8NH90 309 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PP6455Q8WZ26 134 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR8B2Q96RD0 313 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CHST5Q9GZS9 411 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 FKBP14Q9NWM8 211 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 CLEC2DQ9UHP7 191 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SLC7A11Q9UPY5 501 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 MTORP42345 2549 aa13.61□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 IGHV3OR15-7A0A075B7D8 119 aa13.6□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 TRBV2A0A0J9YWF9 115 aa13.6□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 PQLC2LA1A4F0 135 aa13.6□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 A8MXK9 166 aa13.6□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 SLC1A7O00341 560 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms