RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SPI1P17947 270 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 GLRA1P23415 457 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 PAX6P26367 422 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 SLC25A1P53007 311 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 PSME3P61289 254 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 CRMP1Q14194 572 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 FOXB2Q5VYV0 432 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 ZNRF1Q8ND25 227 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 OR5K1Q8NHB7 308 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 PIFOQ8TCI5 191 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 RNF133Q8WVZ7 376 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 NMNAT2Q9BZQ4 307 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 HEXA-AS1Q9H8Q6 139 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 DNAJC27Q9NZQ0 273 aa16.74■□□□□ 0.27
CLIP2-208ENST00000491075 IGKV1D-17A0A075B6S4 117 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 A0A1W2PPH5 198 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ZNF850A8MQ14 1090 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 CCDC22O60826 627 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 GLCEO94923 617 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 CST4P01036 141 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 FABP3P05413 133 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 DCTDP32321 178 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 HABP2Q14520 560 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ZBTB37Q5TC79 503 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 MKXQ8IYA7 352 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 OR8D4Q8NGM9 314 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 PGAM5Q96HS1 289 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 RNF170Q96K19 258 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ABHD6Q9BV23 337 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 CDCA4Q9BXL8 241 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 BRD7Q9NPI1 651 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 TBC1D23Q9NUY8 699 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ZNF319Q9P2F9 582 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ZNF222Q9UK12 451 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 LRP12Q9Y561 859 aa16.73■□□□□ 0.27
CLIP2-208ENST00000491075 ADARB2-AS1A8MUL3 147 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 VGLL3A8MV65 326 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 ACKR3P25106 362 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 LGALS4P56470 323 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 ZDHHC23Q8IYP9 409 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 WIPF2Q8TF74 440 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-208ENST00000491075 HPSE2Q8WWQ2 592 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 CITED2Q99967 270 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-208ENST00000491075 C19orf12Q9NSK7 152 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
CLIP2-208ENST00000491075 MPIG6BO95866 241 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 CLUP10909 449 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 PSG2P11465 335 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 FAHP16930 419 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 OPRL1P41146 370 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 RASSF6Q6ZTQ3 369 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 TIGD4Q8IY51 512 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 LINC00471Q8N535 108 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 RNF148Q8N7C7 305 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 OR6N2Q8NGY6 317 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 PIGCQ92535 297 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 SDSLQ96GA7 329 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 INTS14Q96SY0 518 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 BTBD10Q9BSF8 475 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 FGF23Q9GZV9 251 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-208ENST00000491075 IL1RAPQ9NPH3 570 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 MAGEL2Q9UJ55 1249 aa16.71■□□□□ 0.27
CLIP2-208ENST00000491075 TENM3Q9P273 2699 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 hCG_1809904A0A1W2PP81 198 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 A0A1W2PPE2 198 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 A0A1W2PR64 198 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 A0A1W2PRV1 198 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 PEX14O75381 377 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 H2BFMP0C1H6 154 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 CD33P20138 364 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 CAPZA1P52907 286 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 CNN3Q15417 329 aaKnown RBP16.7■□□□□ 0.26
CLIP2-208ENST00000491075 LINC01590Q5TEZ4 76 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 ERI1Q8IV48 349 aaKnown RBP16.7■□□□□ 0.26
CLIP2-208ENST00000491075 OR9Q2Q8NGE9 314 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 HIST1H2AAQ96QV6 131 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 TSSK6Q9BXA6 273 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 TCF19Q9Y242 345 aa16.7■□□□□ 0.26
CLIP2-208ENST00000491075 RHBDL1O75783 438 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 KRT36O76013 467 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 IFNGP01579 166 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 GPM6AP51674 278 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 RPL31P62899 125 aaKnown RBP16.69■□□□□ 0.26
CLIP2-208ENST00000491075 GNG3P63215 75 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 SHFQ7M4L6 423 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 WFDC9Q8NEX5 89 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 FOXRED1Q96CU9 486 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-208ENST00000491075 AMELYQ99218 206 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 PRSS22Q9GZN4 317 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 WNT10AQ9GZT5 417 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 USE1Q9NZ43 259 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 PITPNC1Q9UKF7 332 aa16.69■□□□□ 0.26
CLIP2-208ENST00000491075 RIIAD1A6NNX1 92 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 IGLL1P15814 213 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 ZNF3P17036 446 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 COX7A1P24310 79 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 HMGA2P52926 109 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 ERVFRD-1P60508 538 aa16.68■□□□□ 0.26
CLIP2-208ENST00000491075 SAMD4BQ5PRF9 694 aaKnown RBP16.68■□□□□ 0.26
CLIP2-208ENST00000491075 THAP5Q7Z6K1 395 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms