RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 ZNF732B4DXR9 585 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 AKR7A2O43488 359 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 DHRS3O75911 302 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 IGHV4-38-2P0DP08 117 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 SELLP14151 372 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 CPT2P23786 658 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 ATP6V1E1P36543 226 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 ISL1P61371 349 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 RIPPLY1Q0D2K3 151 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 TMED1Q13445 227 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 OCLNQ16625 522 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 WDR38Q5JTN6 314 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 SLC25A30Q5SVS4 291 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 ZBTB49Q6ZSB9 765 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 NLRC3Q7RTR2 1065 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 PRSS35Q8N3Z0 413 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 FTMTQ8N4E7 242 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 OR5T2Q8NGG2 359 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 RFKQ969G6 155 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 TECTBQ96PL2 329 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 NUDT16L1Q9BRJ7 211 aaKnown RBP15.05■□□□□ -0
COL9A3-214ENST00000490398 OR51I2Q9H344 312 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 MOB1AQ9H8S9 216 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 GPR173Q9NS66 373 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 SNTG1Q9NSN8 517 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 ACOXLQ9NUZ1 547 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 ZNF69Q9UC07 566 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 SNX5Q9Y5X3 404 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 V9GYS6 101 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 TMEM210A6NLX4 147 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 CFHR2P36980 270 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 KIR3DL2P43630 455 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 MTNR1AP48039 350 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 SNCBQ16143 134 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 PLCXD3Q63HM9 321 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 TMEM42Q69YG0 159 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 Q6ZSR3 168 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 THAP5Q7Z6K1 395 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 C10orf67Q8IYJ2 551 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 FAM216BQ8N7L0 139 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 SPATA3Q8NHX4 192 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 LGALS12Q96DT0 336 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 ESM1Q9NQ30 184 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 FAM118AQ9NWS6 357 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 ENPP5Q9UJA9 477 aa15.04■□□□□ -0
COL9A3-214ENST00000490398 DVL1O14640 695 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 ATP6V1B1P15313 513 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 CCL1P22362 96 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 CEACAM21Q3KPI0 293 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 STUMQ69YW2 141 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 RDH10Q8IZV5 341 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.03■□□□□ -0
COL9A3-214ENST00000490398 RHOXF1Q8NHV9 184 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 APH1BQ8WW43 257 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 ZNF488Q96MN9 340 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 HIST1H2AAQ96QV6 131 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 MRI1Q9BV20 369 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 AMBNQ9NP70 447 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 ERVK-18Q9QC07 812 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 GNG8Q9UK08 70 aa15.03■□□□□ -0
COL9A3-214ENST00000490398 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.03■□□□□ -0
COL9A3-214ENST00000490398 LOC100130705A0A1B0GUX0 176 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 TMPRSS2O15393 492 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 SULT1C4O75897 302 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 SFTPBP07988 381 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 OR12D2P58182 307 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 FGF12P61328 243 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 GNG3P63215 75 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 ZNF91Q05481 1191 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 KCNJ8Q15842 424 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 TUSC1Q2TAM9 212 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 ARMCX4Q5H9R4 360 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 MEDAGQ5VYS4 303 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 LPCAT4Q643R3 524 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 OR10Z1Q8NGY1 313 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 ZNF48Q96MX3 618 aaPredicted RBP15.02■□□□□ -0
COL9A3-214ENST00000490398 ABCB9Q9NP78 766 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 KAAG1Q9UBP8 84 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 NUP50Q9UKX7 468 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 EXOGQ9Y2C4 368 aaKnown RBP15.02■□□□□ -0
COL9A3-214ENST00000490398 MYRFQ9Y2G1 1151 aa15.02■□□□□ -0
COL9A3-214ENST00000490398 NDUFA2O43678 99 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 NRASP01111 189 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 MUC1P15941 1255 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-214ENST00000490398 NANOS3P60323 173 aaKnown RBP15.01□□□□□ -0.01
COL9A3-214ENST00000490398 LRRC36Q1X8D7 754 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 MICBQ29980 383 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 CDONQ4KMG0 1287 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 CLVS2Q5SYC1 327 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 ZBTB37Q5TC79 503 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 HAGHLQ6PII5 290 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-214ENST00000490398 BTNL3Q6UXE8 466 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 BTN2A1Q7KYR7 527 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 BATF2Q8N1L9 274 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 TEX29Q8N6K0 151 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 OR5A2Q8NGI9 324 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 ST8SIA4Q92187 359 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 AQP3Q92482 292 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 UPRTQ96BW1 309 aa15.01□□□□□ -0.01
COL9A3-214ENST00000490398 TRIM36Q9NQ86 728 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms