RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 HTR1FP30939 366 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 MFGE8Q08431 387 aaPredicted RBP14.48□□□□□ -0.09
SEC13-218ENST00000490283 CEACAM21Q3KPI0 293 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 LRRC10Q5BKY1 277 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 CEP78Q5JTW2 689 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 C9orf139Q6ZV77 190 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 MOB3CQ70IA8 216 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 BTN2A1Q7KYR7 527 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 HPSE2Q8WWQ2 592 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 SLC25A28Q96A46 364 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 APOL4Q9BPW4 351 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 DNTTIP1Q9H147 329 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 SNX5Q9Y5X3 404 aa14.48□□□□□ -0.09
SEC13-218ENST00000490283 TMEM89A2RUT3 159 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 DNAJC9-AS1A6NH13 148 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 PRR32B1ATL7 298 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 ZNF732B4DXR9 585 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 GPR37O15354 613 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 OR2T7P0C7T2 308 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 FAHP16930 419 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 TMED1Q13445 227 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 KPNB1Q14974 876 aaKnown RBP14.47□□□□□ -0.09
SEC13-218ENST00000490283 FAM76BQ5HYJ3 339 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 ZNF684Q5T5D7 378 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 C3orf56Q8N813 242 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 YIPF7Q8N8F6 280 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 OR5A2Q8NGI9 324 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 OR2T27Q8NH04 317 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 ZNF671Q8TAW3 534 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 ZDHHC16Q969W1 377 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 WDFY2Q96P53 400 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 TBX5Q99593 518 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 OR52A1Q9UKL2 312 aa14.47□□□□□ -0.09
SEC13-218ENST00000490283 AKR7A2O43488 359 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 NRASP01111 189 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 TTRP02766 147 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 GLRA1P23415 457 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 POLR2IP36954 125 aaKnown RBP14.46□□□□□ -0.09
SEC13-218ENST00000490283 COMPP49747 757 aaPredicted RBP14.46□□□□□ -0.09
SEC13-218ENST00000490283 IKZF1Q13422 519 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 PDCD1Q15116 288 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 STUMQ69YW2 141 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 KRT74Q7RTS7 529 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 FAM220AQ7Z4H9 259 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 ELMOD2Q8IZ81 293 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 CMTM4Q8IZR5 234 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 FAM216BQ8N7L0 139 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 OR10H4Q8NGA5 316 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 MED30Q96HR3 178 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 RAB3IPQ96QF0 476 aaPredicted RBP14.46□□□□□ -0.09
SEC13-218ENST00000490283 SNTG1Q9NSN8 517 aa14.46□□□□□ -0.09
SEC13-218ENST00000490283 MRM2Q9UI43 246 aaKnown RBP14.46□□□□□ -0.09
SEC13-218ENST00000490283 RPUSD1Q9UJJ7 312 aaKnown RBP14.46□□□□□ -0.09
SEC13-218ENST00000490283 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.46□□□□□ -0.09
SEC13-218ENST00000490283 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.45□□□□□ -0.1
SEC13-218ENST00000490283 EBAG9O00559 213 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 RPP14O95059 124 aaKnown RBP14.45□□□□□ -0.1
SEC13-218ENST00000490283 IGLV3-1P01715 115 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 SFTPBP07988 381 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 IL13RA1P78552 427 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 CLVS2Q5SYC1 327 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 ATPAF1Q5TC12 328 aaPredicted RBP14.45□□□□□ -0.1
SEC13-218ENST00000490283 BRD3OSQ6XYD6 125 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 PLEKHG7Q6ZR37 379 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 OR5T2Q8NGG2 359 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 TRUB1Q8WWH5 349 aaKnown RBP14.45□□□□□ -0.1
SEC13-218ENST00000490283 GATAD2BQ8WXI9 593 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 TMIGD2Q96BF3 282 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 SEH1LQ96EE3 360 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 ZNF48Q96MX3 618 aaPredicted RBP14.45□□□□□ -0.1
SEC13-218ENST00000490283 DUX5Q96PT3 197 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 ADI1Q9BV57 179 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 OR51I2Q9H344 312 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 CNTD2Q9H8S5 307 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 PLEKHA1Q9HB21 404 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 ONECUT1Q9UBC0 465 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 NLKQ9UBE8 527 aa14.45□□□□□ -0.1
SEC13-218ENST00000490283 A0A1B0GVI7 797 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 A0A1W2PQL4 384 aaPredicted RBP14.44□□□□□ -0.1
SEC13-218ENST00000490283 METTL15A6NJ78 407 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 DHRS7CA6NNS2 312 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 EI24O14681 340 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 MAGEB4O15481 346 aaPredicted RBP14.44□□□□□ -0.1
SEC13-218ENST00000490283 SRSF10O75494 262 aaKnown RBP14.44□□□□□ -0.1
SEC13-218ENST00000490283 ARF6P62330 175 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 FOXL1Q12952 345 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 TUSC1Q2TAM9 212 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 HAGHLQ6PII5 290 aaPredicted RBP14.44□□□□□ -0.1
SEC13-218ENST00000490283 ZNF573Q86YE8 665 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 H1FXQ92522 213 aaKnown RBP14.44□□□□□ -0.1
SEC13-218ENST00000490283 PPP1R14AQ96A00 147 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 DMRTB1Q96MA1 342 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 WDR13Q9H1Z4 485 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 USE1Q9NZ43 259 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 KPTNQ9Y664 436 aa14.44□□□□□ -0.1
SEC13-218ENST00000490283 SNTNA6NMZ2 147 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 OR2AT4A6NND4 320 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 CLDN34H7C241 214 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 DLGAP1O14490 977 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 SULT1C4O75897 302 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms