RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 DUX4L6P0CJ89 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L7P0CJ90 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 FAHP16930 419 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 GNG3P63215 75 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 ELF3P78545 371 aaPredicted RBP16.38■□□□□ 0.21
SMC4-222ENST00000490207 FAM76BQ5HYJ3 339 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 PLCXD3Q63HM9 321 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L9Q6RFH8 374 aaPredicted RBP16.38■□□□□ 0.21
SMC4-222ENST00000490207 KRT74Q7RTS7 529 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 SSX6Q7RTT6 188 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 SLC36A1Q7Z2H8 476 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 PNLDC1Q8NA58 520 aaKnown RBP16.38■□□□□ 0.21
SMC4-222ENST00000490207 SEH1LQ96EE3 360 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 ZNF48Q96MX3 618 aaPredicted RBP16.38■□□□□ 0.21
SMC4-222ENST00000490207 USE1Q9NZ43 259 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DNAJB11Q9UBS4 358 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4Q9UBX2 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 ZNF879B4DU55 563 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 ZNF732B4DXR9 585 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 HAX1O00165 279 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 MTRF1O75570 445 aaKnown RBP16.37■□□□□ 0.21
SMC4-222ENST00000490207 ALPLP05186 524 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 KRT8P05787 483 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 LIPFP07098 398 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 CEACAM21Q3KPI0 293 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 STUMQ69YW2 141 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 C12orf54Q6X4T0 127 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 C9orf139Q6ZV77 190 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 MOB3CQ70IA8 216 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 BTN2A1Q7KYR7 527 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 FAM216BQ8N7L0 139 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 YIPF7Q8N8F6 280 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 EME1Q96AY2 570 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 PCGF1Q9BSM1 259 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 WDR13Q9H1Z4 485 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 IMPAD1Q9NX62 359 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
SMC4-222ENST00000490207 FBN3Q75N90 2809 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 DNAJC9-AS1A6NH13 148 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 NKX6-3A6NJ46 265 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 OR5B21A6NL26 309 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 AKR7A2O43488 359 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 RPP14O95059 124 aaKnown RBP16.36■□□□□ 0.21
SMC4-222ENST00000490207 ECDO95905 644 aaPredicted RBP16.36■□□□□ 0.21
SMC4-222ENST00000490207 MTNR1AP48039 350 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 TMED1Q13445 227 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 GPR157Q5UAW9 335 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 ELMOD2Q8IZ81 293 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 FGFRL1Q8N441 504 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 OR10H4Q8NGA5 316 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 RFKQ969G6 155 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 RAB3IPQ96QF0 476 aaPredicted RBP16.36■□□□□ 0.21
SMC4-222ENST00000490207 ZMAT3Q9HA38 289 aaKnown RBP16.36■□□□□ 0.21
SMC4-222ENST00000490207 SNTG1Q9NSN8 517 aa16.36■□□□□ 0.21
SMC4-222ENST00000490207 A0A1W2PQL4 384 aaPredicted RBP16.35■□□□□ 0.21
SMC4-222ENST00000490207 P2RY10O00398 339 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 EBAG9O00559 213 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 TOX4O94842 621 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 SFTPBP07988 381 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 OR2T7P0C7T2 308 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 ATP6V1E1P36543 226 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 ALDH3A2P51648 485 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 BAMBIQ13145 260 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 DMRTC1Q5HYR2 192 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 ZNF684Q5T5D7 378 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 METTL11BQ5VVY1 283 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 BRD3OSQ6XYD6 125 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 OR5T2Q8NGG2 359 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 OR5A2Q8NGI9 324 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 OR2T27Q8NH04 317 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 GCDHQ92947 438 aaPredicted RBP16.35■□□□□ 0.21
SMC4-222ENST00000490207 TBX15Q96SF7 602 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 DNTTIP1Q9H147 329 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 OR51I2Q9H344 312 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 SOX21Q9Y651 276 aaPredicted RBP16.35■□□□□ 0.21
SMC4-222ENST00000490207 V9GYS6 101 aa16.35■□□□□ 0.21
SMC4-222ENST00000490207 TMEM89A2RUT3 159 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 NDUFB3O43676 98 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 RHBDL1O75783 438 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 NRASP01111 189 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 MMP9P14780 707 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 GLRA1P23415 457 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 IKZF1Q13422 519 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 ZIK1Q3SY52 487 aaPredicted RBP16.34■□□□□ 0.21
SMC4-222ENST00000490207 LRRC10Q5BKY1 277 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 C10orf67Q8IYJ2 551 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 CBR4Q8N4T8 237 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 TRUB1Q8WWH5 349 aaKnown RBP16.34■□□□□ 0.21
SMC4-222ENST00000490207 HRASLS5Q96KN8 279 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 WDFY2Q96P53 400 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 DUX5Q96PT3 197 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 GPR173Q9NS66 373 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 NLKQ9UBE8 527 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 RPUSD1Q9UJJ7 312 aaKnown RBP16.34■□□□□ 0.21
SMC4-222ENST00000490207 SLC22A13Q9Y226 551 aa16.34■□□□□ 0.21
SMC4-222ENST00000490207 A0A1B0GTI1 187 aa16.33■□□□□ 0.2
SMC4-222ENST00000490207 MDFIC2A0A1B0GVS7 189 aa16.33■□□□□ 0.2
SMC4-222ENST00000490207 METTL15A6NJ78 407 aa16.33■□□□□ 0.2
SMC4-222ENST00000490207 SELLP14151 372 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms