RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 PLCXD3Q63HM9 321 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 C22orf42Q6IC83 251 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 GDPGP1Q6ZNW5 385 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 RNF144BQ7Z419 303 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 LRRTM1Q86UE6 522 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 LYPD6Q86Y78 171 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 CELF2-AS1Q8N7Q2 184 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 SPERTQ8NA61 448 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 DNAAF1Q8NEP3 725 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 OR2Z1Q8NG97 314 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 OR1M1Q8NGA1 313 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 OR5D14Q8NGL3 314 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 SPSB1Q96BD6 273 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 CCL19Q99731 98 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 CHCHD6Q9BRQ6 235 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 CENPOQ9BU64 300 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 RBM38Q9H0Z9 239 aaKnown RBP9.24□□□□□ -0.93
TFF3-203ENST00000489676 TLNRD1Q9H1K6 362 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 CXXC4Q9H2H0 198 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 TPK1Q9H3S4 243 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 RNF167Q9H6Y7 350 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 ZNF701Q9NV72 531 aaPredicted RBP9.24□□□□□ -0.93
TFF3-203ENST00000489676 FOXJ3Q9UPW0 622 aa9.24□□□□□ -0.93
TFF3-203ENST00000489676 C2CD3Q4AC94 2353 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 TRAV1-2A0A0B4J238 106 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 AIREO43918 545 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 ARL6IP5O75915 188 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 CD37P11049 281 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 PAX1P15863 534 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 RAB3AP20336 220 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 CALRP27797 417 aaKnown RBP9.23□□□□□ -0.93
TFF3-203ENST00000489676 CDKN1AP38936 164 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 GATA4P43694 442 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 GPM6AP51674 278 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 RIPPLY3P57055 190 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 GNG3P63215 75 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 TNFAIP6P98066 277 aaPredicted RBP9.23□□□□□ -0.93
TFF3-203ENST00000489676 ZNF154Q13106 437 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 TESK1Q15569 626 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 GPR107Q5VW38 600 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 MOB3CQ70IA8 216 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 OR5A2Q8NGI9 324 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 NPRL2Q8WTW4 380 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 ITLN1Q8WWA0 313 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 OR2V2Q96R30 315 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 GFI1Q99684 422 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 RTL8AQ9BWD3 113 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 EXOSC4Q9NPD3 245 aaKnown RBP9.23□□□□□ -0.93
TFF3-203ENST00000489676 IL19Q9UHD0 177 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 SSR3Q9UNL2 185 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 PMF1-BGLAPU3KQ54 211 aa9.23□□□□□ -0.93
TFF3-203ENST00000489676 MAP1AP78559 2803 aaPredicted RBP9.23□□□□□ -0.93
TFF3-203ENST00000489676 CCDC168Q8NDH2 2452 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
TFF3-203ENST00000489676 LOC100506127A0A0U1RQW1 187 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 TMEM210A6NLX4 147 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 NDUFS7O75251 213 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 HPXP02790 462 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 ALDOBP05062 364 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 BMP4P12644 408 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 SRMP19623 302 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 PRKACBP22694 351 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 MPZP25189 248 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 TGFBR1P36897 503 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 FUT6P51993 359 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 PPP3R1P63098 170 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 CCL8P80075 99 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 PRAMEF6Q5VXH4 476 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 NR2C2APQ86WQ0 139 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 C11orf53Q8IXP5 236 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 NKAIN3Q8N8D7 197 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 OR52N4Q8NGI2 321 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 OR8S1Q8NH09 359 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 TRMT10AQ8TBZ6 339 aaKnown RBP9.22□□□□□ -0.93
TFF3-203ENST00000489676 RNF170Q96K19 258 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 LURAP1Q96LR2 239 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 SPACA5Q96QH8 159 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 MICU1Q9BPX6 476 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 OR51I2Q9H344 312 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 CXorf56Q9H5V9 222 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 SAP30LQ9HAJ7 183 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 TMEM138Q9NPI0 162 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 SNTG1Q9NSN8 517 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 CKLFQ9UBR5 152 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 PLEKHA6Q9Y2H5 1048 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 ARID1AO14497 2285 aa9.22□□□□□ -0.93
TFF3-203ENST00000489676 A0A0G2JK05 382 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 IGHV3-64DA0A0J9YX35 117 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 LRP5LA4QPB2 252 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 TRIM64BA6NI03 449 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 ZNF732B4DXR9 585 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 RP2O75695 350 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 IGHV4-39P01824 125 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 TNFSF4P23510 183 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 CFPP27918 469 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 BDKRB2P30411 391 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 PMELP40967 661 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 MTNR1BP49286 362 aa9.21□□□□□ -0.94
TFF3-203ENST00000489676 SRP9P49458 86 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms