RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TVP23AA6NH52 213 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 KRBOX1C9JBD0 128 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 NDUFC2-KCTD14E9PQ53 114 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 BET1O15155 118 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 PSPHP1O15172 72 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 EIF1BO60739 113 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 GCM2O75603 506 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 SC5DO75845 299 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 GLSO94925 669 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 APCSP02743 223 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 MMP7P09237 267 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 NPY1RP25929 384 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 LOXP28300 417 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 LCN1P31025 176 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 EIF1P41567 113 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 RANBP1P43487 201 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 RGS6P49758 472 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 MTPNP58546 118 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 LOXL1Q08397 574 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 SNRNP35Q16560 246 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 FAM27D1Q5T7N8 215 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 MFSD14CQ5VZR4 134 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 STEAP4Q687X5 459 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 NANOGP8Q6NSW7 305 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 FAHD1Q6P587 224 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 DEGS2Q6QHC5 323 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 OPN5Q6U736 354 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 COPS6Q7L5N1 327 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 DRAXINQ8NBI3 349 aaPredicted RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 ENKURQ8TC29 256 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 DCAKDQ8WVC6 231 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 TMEM239Q8WW34 195 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 ESR2Q92731 530 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 FLYWCH2Q96CP2 140 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 RMI2Q96E14 147 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 FAM19A4Q96LR4 140 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 ZNF488Q96MN9 340 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 Q96MT0 163 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 GABRG3Q99928 467 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 SAMD10Q9BYL1 202 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 PORCNQ9H237 461 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 OR52D1Q9H346 318 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 C1orf198Q9H425 327 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 CHMP4BQ9H444 224 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 C12orf10Q9HB07 376 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 NDRG2Q9UN36 371 aaKnown RBP1.8□□□□□ -2.12
RFC4-213ENST00000489028 AP3M1Q9Y2T2 418 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 ACOT9Q9Y305 439 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 GMEB1Q9Y692 573 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 TRIOBPQ9H2D6 2365 aa1.8□□□□□ -2.12
RFC4-213ENST00000489028 FAM240AA0A1B0GVK7 77 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 A0A1B0GW15 77 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 M0R1B8 84 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 MANBAO00462 879 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TCAPO15273 167 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 GATBO75879 557 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 VAMP5O95183 116 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 CST4P01036 141 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TRBV12-3P01733 135 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 IGHV3-11P01762 117 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 HLA-DQA1P01909 254 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 MT-ND4P03905 459 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 RPN2P04844 631 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 C1GALT1C1LP0DN25 315 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 HSPD1P10809 573 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 CD9P21926 228 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 CXCR1P25024 350 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 PSMB2P49721 201 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SIGLEC14Q08ET2 396 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SYCNQ0VAF6 134 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 INCA1Q0VD86 236 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 STX3Q13277 289 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 DYNC1I2Q13409 638 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 MAD2L1BPQ15013 274 aaPredicted RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 TNXAQ16473 311 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 CDNFQ49AH0 187 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 IDNKQ5T6J7 187 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SYT6Q5T7P8 510 aaPredicted RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 HHATQ5VTY9 493 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 RESP18Q5W5W9 173 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 AP1ARQ63HQ0 302 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 APOBEC3HQ6NTF7 200 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 GUSBP11Q6P575 273 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 ZNF880Q6PDB4 577 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TMEM205Q6UW68 189 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 Q6ZSR6 202 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SLC16A13Q7RTY0 426 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 ERO1BQ86YB8 467 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 RIMKLAQ8IXN7 391 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TMEM256Q8N2U0 113 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 CYB561A3Q8NBI2 242 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 OR4K5Q8NGD3 323 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 OR52P1PQ8NH57 321 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SYNPRQ8TBG9 265 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 NT5CQ8TCD5 201 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TMEM159Q96B96 161 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 MRPL48Q96GC5 212 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 SMARCD1Q96GM5 515 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SNF8Q96H20 258 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 NARS2Q96I59 477 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms