RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-219ENST00000488186 RIN1Q13671 783 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 MPPED2Q15777 294 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 AVPI1Q5T686 147 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 SVOPQ8N4V2 548 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 GHSRQ92847 366 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 TECTBQ96PL2 329 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 RNF7Q9UBF6 113 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 LRRC42Q9Y546 428 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 SIRT4Q9Y6E7 314 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-219ENST00000488186 FAM230AA0A1W2PPH8 454 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 OR5B21A6NL26 309 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 CYB5R3P00387 301 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-219ENST00000488186 HEXAP06865 529 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 SOX2P48431 317 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 BDH1Q02338 343 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 IRF3Q14653 427 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 CNN3Q15417 329 aaKnown RBP13.28□□□□□ -0.28
C9orf3-219ENST00000488186 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 TMEM42Q69YG0 159 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 DMKNQ6E0U4 476 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-219ENST00000488186 KRT74Q7RTS7 529 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 SERPINA12Q8IW75 414 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
C9orf3-219ENST00000488186 ZNF485Q8NCK3 441 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 OR51A4Q8NGJ6 313 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 OR5D14Q8NGL3 314 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 OR10AC1Q8NH08 325 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 UFD1Q92890 307 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 OR5M11Q96RB7 305 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 NARFLQ9H6Q4 476 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 NPTNQ9Y639 398 aa13.28□□□□□ -0.28
C9orf3-219ENST00000488186 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 TMEM178BH3BS89 294 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 CDIPTO14735 213 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 PLPP2O43688 288 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 THBS2P35442 1172 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 MAP2K4P45985 399 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 FUT6P51993 359 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 CHN2P52757 468 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF181Q2M3W8 571 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 YIF1BQ5BJH7 314 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF573Q86YE8 665 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF671Q8TAW3 534 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 TRMT10AQ8TBZ6 339 aaKnown RBP13.27□□□□□ -0.29
C9orf3-219ENST00000488186 Q8TCH9 128 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 NPRL2Q8WTW4 380 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 HPSE2Q8WWQ2 592 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 ADAT3Q96EY9 351 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-219ENST00000488186 BORCS8Q96FH0 119 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 C18orf12Q96KH6 178 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 CHST5Q9GZS9 411 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 WIPI2Q9Y4P8 454 aa13.27□□□□□ -0.29
C9orf3-219ENST00000488186 PPIAL4EA0A075B759 164 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 LRP5LA4QPB2 252 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PPIAL4DF5H284 164 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 MAGEB3O15480 346 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 DYSFO75923 2080 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PTBP3O95758 552 aaKnown RBP13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PPIAL4FP0DN26 164 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ATF1P18846 271 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PRKACBP22694 351 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PMELP40967 661 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF154Q13106 437 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF367Q7RTV3 350 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 SCCPDHQ8NBX0 429 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 MAPK1IP1LQ8NDC0 245 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
C9orf3-219ENST00000488186 COX4I2Q96KJ9 171 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 GAL3ST1Q99999 423 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ZCCHC4Q9H5U6 513 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 LSM2Q9Y333 95 aaKnown RBP13.26□□□□□ -0.29
C9orf3-219ENST00000488186 PPIAL4AQ9Y536 164 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 ZANQ9Y493 2812 aa13.26□□□□□ -0.29
C9orf3-219ENST00000488186 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF205O95201 554 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 CD1AP06126 327 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 HAAOP46952 286 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 ATP1B3P54709 279 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 BTG1P62324 171 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 LOXL1Q08397 574 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 TBCEQ15813 527 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 FAM76BQ5HYJ3 339 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 UTS2BQ765I0 119 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 MUC20Q8N307 709 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-219ENST00000488186 MS4A15Q8N5U1 240 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 RPS4Y2Q8TD47 263 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 LRRC29Q8WV35 223 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 THRSPQ92748 146 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 ISYNA1Q9NPH2 558 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 DCAF16Q9NXF7 216 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 CKLFQ9UBR5 152 aa13.25□□□□□ -0.29
C9orf3-219ENST00000488186 LRCH1Q9Y2L9 728 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms