RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 SH3GL1Q99961 368 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 ANKRD19PQ9H560 264 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 FN3KRPQ9HA64 309 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 RNPEPL1Q9HAU8 725 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 TNFRSF19Q9NS68 423 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 PTTG3PQ9NZH4 202 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 MRPL15Q9P015 296 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 GRHPRQ9UBQ7 328 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 FAM96BQ9Y3D0 163 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 MAB21L2Q9Y586 359 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 LHFPL6Q9Y693 200 aa4.14□□□□□ -1.75
R3HDM1-218ENST00000487294 TRAV27A0A087WT01 109 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 A0A087WUU8 490 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 IGLV1-36A0A0B4J1U3 117 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ELOVL7A1L3X0 281 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 BTBD17A6NE02 478 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CD300LBA8K4G0 201 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 EFCAB9A8MZ26 197 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 H7C1C5 153 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 FXYD1O00168 92 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 XKRYO14609 159 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CDC42EP2O14613 210 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 DVL1O14640 695 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 FFAR1O14842 300 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ANGPT2O15123 496 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ADAM20O43506 726 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 OR10H3O60404 316 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SLC16A7O60669 478 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 HOXB6P17509 224 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 TNFRSF1BP20333 461 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 EEF1B2P24534 225 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 GABRA5P31644 462 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 KDELR2P33947 212 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 OR1E2P47887 323 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 TGM4P49221 684 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 UBE2E1P51965 193 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ARF6P62330 175 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 LCN6P62502 163 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SELENOWP63302 87 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 EMX1Q04741 257 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CYLC2Q14093 348 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ZNF260Q3ZCT1 412 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ZBED5Q49AG3 693 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CYBRD1Q53TN4 286 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 BEND6Q5SZJ8 279 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 METTL21CQ5VZV1 264 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 NANOGP8Q6NSW7 305 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 C1orf94Q6P1W5 598 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 MBOAT2Q6ZWT7 520 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 PGAP1Q75T13 922 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 VMO1Q7Z5L0 202 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 TSEN54Q7Z6J9 526 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ANKRD13BQ86YJ7 626 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 Q8N2B8 174 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 GCSAMQ8N6F7 178 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 Q8N7P7 452 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 BHLHE23Q8NDY6 225 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SLC26A10Q8NG04 563 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 OR13C2Q8NGS9 318 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 MRAPQ8TCY5 172 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ZNF570Q96NI8 536 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CDCA4Q9BXL8 241 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SYT4Q9H2B2 425 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CENPHQ9H3R5 247 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 OPA3Q9H6K4 179 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 RAB18Q9NP72 206 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 PNRC2Q9NPJ4 139 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 NKIRAS1Q9NYS0 192 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 CYB5R1Q9UHQ9 305 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 PRPF19Q9UMS4 504 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SIGLEC7Q9Y286 467 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 ADAM18Q9Y3Q7 739 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 SIRT4Q9Y6E7 314 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 DNAH3Q8TD57 4116 aa4.13□□□□□ -1.75
R3HDM1-218ENST00000487294 VGLL3A8MV65 326 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 M0R1W7 72 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 DCTN6O00399 190 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 IMPA2O14732 288 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 NPFFO15130 113 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 ARPC3O15145 178 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 SHOX2O60902 331 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 NDUFB2O95178 105 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 PRB2P02812 416 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 CA6P23280 308 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 CRABP1P29762 137 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 SAA4P35542 130 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 GGT2P36268 569 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 RPL4P36578 427 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 DDOSTP39656 456 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 FXYD6P3P58550 94 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 MAGOHP61326 146 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 MZT1Q08AG7 82 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 KRR1Q13601 381 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 TRAM2Q15035 370 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 OR8G1Q15617 311 aa4.12□□□□□ -1.75
R3HDM1-218ENST00000487294 TWIST1Q15672 202 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms