RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 DNAJC3Q13217 504 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 OR1Q1Q15612 314 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 C5orf64Q2M2E5 130 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 C6orf99Q4VX62 202 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 MFSD14CQ5VZR4 134 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 TMEM236Q5W0B7 351 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 KDM4DQ6B0I6 523 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 RAB43Q86YS6 212 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 INO80EQ8NBZ0 244 aaPredicted RBP1.88□□□□□ -2.11
LTN1-206ENST00000486427 TMEM159Q96B96 161 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 APH1AQ96BI3 265 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 S100PBPQ96BU1 408 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 RCN3Q96D15 328 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 PDCD1LG2Q9BQ51 273 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 SFXN3Q9BWM7 321 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 PXMP2Q9NR77 195 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 KIAA1671Q9BY89 1806 aa1.88□□□□□ -2.11
LTN1-206ENST00000486427 BAZ2AQ9UIF9 1905 aaKnown RBP1.87□□□□□ -2.11
LTN1-206ENST00000486427 A0A0B4J2E0 115 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 IGKV1-6A0A0C4DH72 117 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 E7EQL1 145 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 LINC01619G3V211 115 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 J3QKU1 62 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 SLC19A2O60779 497 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 IGKV1-39P01597 117 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 CATP04040 527 aaKnown RBP1.87□□□□□ -2.11
LTN1-206ENST00000486427 IGKV1D-39P04432 117 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 MMP7P09237 267 aaPredicted RBP1.87□□□□□ -2.11
LTN1-206ENST00000486427 SFTPCP11686 197 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 CXCR1P25024 350 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 MAGEA1P43355 309 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 ACOT2P49753 483 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 TAS2R39P59534 338 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 HADHQ16836 314 aaKnown RBP1.87□□□□□ -2.11
LTN1-206ENST00000486427 ZNF678Q5SXM1 525 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 OR2T5Q6IEZ7 315 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 BBS7Q8IWZ6 715 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 CMTM8Q8IZV2 173 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 KIF2BQ8N4N8 673 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 LY6G5BQ8NDX9 201 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 OR2T29Q8NH02 315 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 GPX8Q8TED1 209 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 CA5BP1Q8WTZ4 195 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 NAT6Q93015 286 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 SMARCD1Q96GM5 515 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 UBE2E2Q96LR5 201 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 SCGB3A2Q96PL1 93 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 CSPG4P5Q96PW8 444 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 SIGLEC1Q9BZZ2 1709 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 IQCGQ9H095 443 aaKnown RBP1.87□□□□□ -2.11
LTN1-206ENST00000486427 CLSTN2Q9H4D0 955 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 REEP1Q9H902 201 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 ZC4H2Q9NQZ6 224 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 HMGXB4Q9UGU5 601 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 WDR19Q8NEZ3 1342 aa1.87□□□□□ -2.11
LTN1-206ENST00000486427 SLC22A20A6NK97 555 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 AKR7A2O43488 359 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 MPDU1O75352 247 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 PTHP01270 115 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 IGHV1-46P01743 117 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 CLDN8P56748 225 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 SPAG1Q07617 926 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 PLCXD3Q63HM9 321 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 STEAP4Q687X5 459 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 AMMECR1LQ6DCA0 310 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 DAW1Q8N136 415 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 BBOF1Q8ND07 529 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 OR4C13Q8NGP0 309 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 CMTM2Q8TAZ6 248 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 RDH12Q96NR8 316 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 NAA50Q9GZZ1 169 aaKnown RBP1.86□□□□□ -2.11
LTN1-206ENST00000486427 DUSP21Q9H596 190 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 C8orf33Q9H7E9 229 aaPredicted RBP1.86□□□□□ -2.11
LTN1-206ENST00000486427 FBXO8Q9NRD0 319 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 CA10Q9NS85 328 aa1.86□□□□□ -2.11
LTN1-206ENST00000486427 CAB39Q9Y376 341 aaPredicted RBP1.86□□□□□ -2.11
LTN1-206ENST00000486427 IGLV10-54A0A075B6I4 117 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 A0A1B0GTQ1 180 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 ISPDA4D126 451 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 GOLGA6L4A6NEF3 574 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 SDHAF1A6NFY7 115 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 CCDC22O60826 627 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 FARS2O95363 451 aaKnown RBP1.85□□□□□ -2.11
LTN1-206ENST00000486427 MAS1P04201 325 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 ATP6V0D1P61421 351 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 RAB11AP62491 216 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 RPL18AQ02543 176 aaKnown RBP1.85□□□□□ -2.11
LTN1-206ENST00000486427 INCA1Q0VD86 236 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 RAB11BQ15907 218 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 PIP5KL1Q5T9C9 394 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 ZNF470Q6ECI4 717 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 ANGPTL8Q6UXH0 198 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 OTUD6AQ7L8S5 288 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 AGR3Q8TD06 166 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 PEX13Q92968 403 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 MS4A8Q9BY19 250 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 PARP11Q9NR21 331 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 HEBP1Q9NRV9 189 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 OR51B2Q9Y5P1 312 aa1.85□□□□□ -2.11
LTN1-206ENST00000486427 BRCA1P38398 1863 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms