RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 OR1M1Q8NGA1 313 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 OR13C5Q8NGS8 318 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 Q8TCH9 128 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 CCL17Q92583 94 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 Q96MF0 132 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 PIMREGQ9BSJ6 248 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 TLNRD1Q9H1K6 362 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 FN3KRPQ9HA64 309 aa16.82■□□□□ 0.28
COL6A2-208ENST00000485591 GRPP07492 148 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 CPEP16870 476 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 SOX2P48431 317 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 GPM6AP51674 278 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 TMEM33P57088 247 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 CNN3Q15417 329 aaKnown RBP16.81■□□□□ 0.28
COL6A2-208ENST00000485591 Q499Y3 187 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 FAM76BQ5HYJ3 339 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 DMRTC1Q5HYR2 192 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 LIPKQ5VXJ0 399 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 SERPINA12Q8IW75 414 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 MS4A15Q8N5U1 240 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF420Q8TAQ5 688 aaPredicted RBP16.81■□□□□ 0.28
COL6A2-208ENST00000485591 TMEM106AQ96A25 262 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 NR1H4Q96RI1 486 aaPredicted RBP16.81■□□□□ 0.28
COL6A2-208ENST00000485591 TMEM106BQ9NUM4 274 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 UFSP2Q9NUQ7 469 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 TREM2Q9NZC2 230 aa16.81■□□□□ 0.28
COL6A2-208ENST00000485591 MYO9AB2RTY4 2548 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 IGHV4-30-2A0A087WSY4 118 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 VWC2LB2RUY7 222 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF732B4DXR9 585 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 CLDN25C9JDP6 229 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 SLC25A16P16260 332 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 SPNS3Q6ZMD2 512 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 KCTD8Q6ZWB6 473 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 TSPAN14Q8NG11 270 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 OR11L1Q8NGX0 322 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 THRSPQ92748 146 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 HPS1Q92902 700 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 ZCCHC4Q9H5U6 513 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 DCAF16Q9NXF7 216 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 SLC7A11Q9UPY5 501 aa16.8■□□□□ 0.28
COL6A2-208ENST00000485591 A0A087WXM4 84 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 IGKV1-9A0A0C4DH69 117 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 PQLC2LA1A4F0 135 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 LRP5LA4QPB2 252 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 A6NLC8 198 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 LRRC30A6NM36 301 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 ALX3O95076 343 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 ATF1P18846 271 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 PMELP40967 661 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 ARMCX4Q5H9R4 360 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 PHC2Q8IXK0 858 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 C11orf53Q8IXP5 236 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 DNAAF1Q8NEP3 725 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 OR5D14Q8NGL3 314 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 OR13C9Q8NGT0 318 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 SPSB1Q96BD6 273 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 OR14A2Q96R54 314 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 TMED9Q9BVK6 235 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 BPESC1Q9GZL8 116 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 OR51I2Q9H344 312 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 C1orf123Q9NWV4 160 aa16.79■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF879B4DU55 563 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 TMEM178BH3BS89 294 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 SULT1B1O43704 296 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 AZGP1P25311 298 aaKnown RBP16.78■□□□□ 0.28
COL6A2-208ENST00000485591 PSMA1P25786 263 aaKnown RBP16.78■□□□□ 0.28
COL6A2-208ENST00000485591 NR4A2P43354 598 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 GPR6P46095 362 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-208ENST00000485591 FUT6P51993 359 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 HNRNPA0Q13151 305 aaKnown RBP16.78■□□□□ 0.28
COL6A2-208ENST00000485591 TRAM1Q15629 374 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 ASPHD2Q6ICH7 369 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF529Q6P280 563 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 C1orf87Q8N0U7 546 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 SCCPDHQ8NBX0 429 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 TRMT10AQ8TBZ6 339 aaKnown RBP16.78■□□□□ 0.28
COL6A2-208ENST00000485591 NPRL2Q8WTW4 380 aa16.78■□□□□ 0.28
COL6A2-208ENST00000485591 TRBV5-7A0A0A0MS05 114 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 TRIM64BA6NI03 449 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 PPIHO43447 177 aaKnown RBP16.77■□□□□ 0.28
COL6A2-208ENST00000485591 SC5DO75845 299 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 CYB5R3P00387 301 aaPredicted RBP16.77■□□□□ 0.28
COL6A2-208ENST00000485591 IRF2P14316 349 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 FSTP19883 344 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 PRKACBP22694 351 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 MAPK3P27361 379 aaPredicted RBP16.77■□□□□ 0.28
COL6A2-208ENST00000485591 PSMB9P28065 219 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 SSX1Q16384 188 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 WDR82Q6UXN9 313 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 PEG10Q86TG7 708 aaKnown RBP16.77■□□□□ 0.28
COL6A2-208ENST00000485591 ZNF573Q86YE8 665 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 RPL3LQ92901 407 aaKnown RBP16.77■□□□□ 0.28
COL6A2-208ENST00000485591 RAB1CQ92928 201 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 BORCS8Q96FH0 119 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 TIMD4Q96H15 378 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 DERL3Q96Q80 235 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 NDUFB11Q9NX14 153 aa16.77■□□□□ 0.28
COL6A2-208ENST00000485591 TAS2R4Q9NYW5 299 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms