RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 TSSC4Q9Y5U2 329 aaPredicted RBP2.54□□□□□ -2
FNDC3B-210ENST00000483344 CACNA1GO43497 2377 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 CACNA1HO95180 2353 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 TECTAO75443 2155 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 TRIOO75962 3097 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 MYH3P11055 1940 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 DOCK1Q14185 1865 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 A0A0G2JMZ2 1700 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 EPG5Q9HCE0 2579 aa2.54□□□□□ -2
FNDC3B-210ENST00000483344 COL4A6Q14031 1691 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 BRWD1Q9NSI6 2320 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 TRANK1O15050 2925 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 MYO9BQ13459 2157 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 MYO10Q9HD67 2058 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 A0A0J9YXV3 536 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 H7C1H1 209 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 SOCS1O15524 211 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 FCN3O75636 299 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 SLC22A5O76082 557 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 OR8U9P0C7N5 309 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 ZNF286BP0CG31 522 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 RAB4AP20338 218 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 SLC1A2P43004 574 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 CXCL12P48061 93 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 NCF4Q15080 339 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 TRMT5Q32P41 509 aaKnown RBP2.53□□□□□ -2
FNDC3B-210ENST00000483344 MPV17L2Q567V2 206 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 MFSD14CQ5VZR4 134 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 ADNP2Q6IQ32 1131 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 ZNF880Q6PDB4 577 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 CLEC2AQ6UVW9 174 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 SLC16A13Q7RTY0 426 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 KATNAL2Q8IYT4 538 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 ZNF709Q8N972 641 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 OR56A4Q8NGH8 313 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 OR6N1Q8NGY5 312 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 OR52E5Q8NH55 327 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 OR10G6Q8NH81 332 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 LILRB4Q8NHJ6 448 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 JSRP1Q96MG2 331 aaPredicted RBP2.53□□□□□ -2
FNDC3B-210ENST00000483344 RNF145Q96MT1 663 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 PIGUQ9H490 435 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 TMEM27Q9HBJ8 222 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 MYOZ1Q9NP98 299 aaPredicted RBP2.53□□□□□ -2
FNDC3B-210ENST00000483344 MRPL22Q9NWU5 206 aaKnown RBP2.53□□□□□ -2
FNDC3B-210ENST00000483344 NCOR2Q9Y618 2525 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 PLXNA3P51805 1871 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 PKD1L2Q7Z442 2459 aa2.53□□□□□ -2
FNDC3B-210ENST00000483344 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 GBF1Q92538 1859 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 PTPRZ1P23471 2315 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 DOCK2Q92608 1830 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 SPTBN4Q9H254 2564 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 TRAV25A0A0B4J276 109 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 TRAV40A0A0B4J280 105 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 A0A1W2PQ67 120 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 COLCA2A8K830 154 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 PDZK1P1A8MUH7 402 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 GOLGA8TH3BQL2 631 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 CHST10O43529 356 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 CCNKO75909 580 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 MPZL1O95297 269 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 IFNW1P05000 195 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 POLR2MP0CAP2 368 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 UBCP0CG48 685 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 USF1P22415 310 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 RFC3P40938 356 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 SLC11A1P49279 550 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 RAB7AP51149 207 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 UBE2MP61081 183 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 CRADDP78560 199 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 CDK5Q00535 292 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 AP1ARQ63HQ0 302 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZFP1Q6P2D0 407 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 HORMAD1Q86X24 394 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZNF561Q8N587 486 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZNF615Q8N8J6 731 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 LINC01560Q8TB33 94 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ESR2Q92731 530 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 BTN2A3PQ96KV6 586 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 IQCGQ9H095 443 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 SLC38A10Q9HBR0 1119 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 LYRM4Q9HD34 91 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 PDP1Q9P0J1 537 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 MYEF2Q9P2K5 600 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 GGA2Q9UJY4 613 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 CAB39Q9Y376 341 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 LAMA5O15230 3695 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZFHX2Q9C0A1 2572 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 SIPA1L1O43166 1804 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 ZNF236Q9UL36 1845 aa2.52□□□□□ -2.01
FNDC3B-210ENST00000483344 GVINP1Q7Z2Y8 2422 aa2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 TPRP12270 2363 aaKnown RBP2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 SPEGQ15772 3267 aa2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 CHD8Q9HCK8 2581 aa2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 TRAV6A0A075B6T7 132 aa2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 IGHV1-69DA0A0B4J2H0 117 aa2.51□□□□□ -2.01
FNDC3B-210ENST00000483344 IGKV1-8A0A0C4DH67 115 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms