RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 EGFL6Q8IUX8 553 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 C19orf18Q8NEA5 215 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 DEFB108BQ8NET1 73 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 LRRC29Q8WV35 223 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 RPL3LQ92901 407 aaKnown RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 ZNF649Q9BS31 505 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 JAM3Q9BX67 310 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 FGF23Q9GZV9 251 aaPredicted RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 METTL17Q9H7H0 456 aaPredicted RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 ISG20L2Q9H9L3 353 aaKnown RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 PATZ1Q9HBE1 687 aaKnown RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 TMEM165Q9HC07 324 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 GPR173Q9NS66 373 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 CHCHD3Q9NX63 227 aaKnown RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
SNX4-205ENST00000482965 EXOSC1Q9Y3B2 195 aaKnown RBP7.36□□□□□ -1.23
SNX4-205ENST00000482965 NAV3Q8IVL0 2385 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TRAV38-1A0A0B4J264 116 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TRAV20A0A0B4J274 112 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 EFCAB10A6NFE3 127 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OOEPA6NGQ2 149 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OR5B21A6NL26 309 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OR4C45A6NMZ5 311 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 CDIPTO14735 213 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 PLPP2O43688 288 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 XPNPEP2O43895 674 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 FOXH1O75593 365 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 FSTL3O95633 263 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 CCDC159P0C7I6 412 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 LIMS3P0CW19 117 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 RPS2P15880 293 aaKnown RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 PCMT1P22061 227 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 ETV1P50549 477 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 CCR9P51686 369 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 HOXA4Q00056 320 aaPredicted RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 KCNJ8Q15842 424 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 CR1LQ2VPA4 569 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 ZNF404Q494X3 552 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 ESCO2Q56NI9 601 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 DMRTC1Q5HYR2 192 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMEM42Q69YG0 159 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 SFRP4Q6FHJ7 346 aaPredicted RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 WDR82Q6UXN9 313 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 IZUMO2Q6UXV1 221 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMPRSS11AQ6ZMR5 421 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 NLRC3Q7RTR2 1065 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 C11orf53Q8IXP5 236 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 RDH10Q8IZV5 341 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 STX19Q8N4C7 294 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 GCSAMQ8N6F7 178 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 ZNF676Q8N7Q3 588 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 SCCPDHQ8NBX0 429 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 BPIFB6Q8NFQ5 453 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OR8B3Q8NGG8 313 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OR5A2Q8NGI9 324 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 HAVCR2Q8TDQ0 301 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 GGHQ92820 318 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMEM186Q96B77 213 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMEM80Q96HE8 168 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 OR8B2Q96RD0 313 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMEM246Q9BRR3 403 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 COMMD4Q9H0A8 199 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 SHARPINQ9H0F6 387 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TLNRD1Q9H1K6 362 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TRIM36Q9NQ86 728 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 HIF1ANQ9NWT6 349 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 TMEM160Q9NX00 188 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 CNOT2Q9NZN8 540 aaKnown RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 MIOXQ9UGB7 285 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 HHLA2Q9UM44 414 aa7.35□□□□□ -1.23
SNX4-205ENST00000482965 DIMT1Q9UNQ2 313 aaKnown RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 CAB39Q9Y376 341 aaPredicted RBP7.35□□□□□ -1.23
SNX4-205ENST00000482965 SETD2Q9BYW2 2564 aaPredicted RBP7.34□□□□□ -1.23
SNX4-205ENST00000482965 IGHV3OR15-7A0A075B7D8 119 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 ANKRD61A6NGH8 418 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 E9PI62 339 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 F5H0A9 414 aaPredicted RBP7.34□□□□□ -1.23
SNX4-205ENST00000482965 CRLF1O75462 422 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 GATBO75879 557 aaKnown RBP7.34□□□□□ -1.23
SNX4-205ENST00000482965 SERPINA3P01011 423 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 LHBP01229 141 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 ISG15P05161 165 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 WNT2P09544 360 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 PIPP12273 146 aaPredicted RBP7.34□□□□□ -1.23
SNX4-205ENST00000482965 ZNF20P17024 532 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 EGR1P18146 543 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 HNF1AP20823 631 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 CPT2P23786 658 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 HSPA13P48723 471 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 TGM4P49221 684 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 GMFBP60983 142 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 SEC61A1P61619 476 aaKnown RBP7.34□□□□□ -1.23
SNX4-205ENST00000482965 LCN2P80188 198 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 ST3GAL4Q11206 333 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 CHRFAM7AQ494W8 412 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 FAM76BQ5HYJ3 339 aa7.34□□□□□ -1.23
SNX4-205ENST00000482965 OR2G6Q5TZ20 316 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms