RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CD81P60033 236 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 LSM6P62312 80 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 IL5RAQ01344 420 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PMS2P11Q13670 270 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 HABP2Q14520 560 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CDNFQ49AH0 187 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 BEX5Q5H9J7 111 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 FAM27BQ5VT28 67 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 MEDAGQ5VYS4 303 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 NXNL2Q5VZ03 156 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PLBD1Q6P4A8 553 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PLET1Q6UQ28 207 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM108Q6UXF1 575 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 UNQ6126/PRO20091Q6UXV3 157 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 FOXL2NBQ6ZUU3 175 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 SHFQ7M4L6 423 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CPOQ8IVL8 374 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 WDFY1Q8IWB7 410 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 OR6V1Q8N148 313 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 TCEANCQ8N8B7 351 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 YIPF7Q8N8F6 280 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 RNF152Q8N8N0 203 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 DMBX1Q8NFW5 382 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 OR8J1Q8NGP2 316 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 OR9Q1Q8NGQ5 310 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 OR1J2Q8NGS2 313 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM163Q8TC26 289 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 BCL2L2Q92843 193 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM68Q96MH6 324 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 WFIKKN1Q96NZ8 548 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 SDHCQ99643 169 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 UFSP2Q9NUQ7 469 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 RBFOX1Q9NWB1 397 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CLN6Q9NWW5 311 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 MRPS7Q9Y2R9 242 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 HSPB11Q9Y547 144 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 SLC25A15Q9Y619 301 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 UBR5O95071 2799 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 IGLV1-36A0A0B4J1U3 117 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 IGKV1D-43A0A0B4J1Z2 117 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 A0A1W2PR80 420 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 E9PQ18 207 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SULT1C2O00338 296 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PHYHO14832 338 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MYL12BO14950 172 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PRKYO43930 277 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 HLA-HP01893 362 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 CRYAAP02489 173 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 GYPBP06028 91 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 FGF2P09038 288 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 FBP1P09467 338 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PRF1P14222 555 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 CBR1P16152 277 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 CD36P16671 472 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 IGFBP2P18065 325 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MYL12AP19105 171 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PTAFRP25105 342 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SSTR2P30874 369 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PYCR1P32322 319 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 APLNRP35414 380 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ATP6V1E1P36543 226 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF83P51522 516 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 CDH11P55287 796 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 DHODHQ02127 395 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PIGFQ07326 219 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SNTB1Q13884 538 aaKnown RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ETFDHQ16134 617 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 TBC1D28Q2M2D7 210 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 RNF212Q495C1 297 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ARL9Q6T311 187 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MEPCEQ7L2J0 689 aaKnown RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MDP1Q86V88 176 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SKA3Q8IX90 412 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PHC2Q8IXK0 858 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 Q8N1X5 172 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 WDR31Q8NA23 367 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 UXS1Q8NBZ7 420 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 GJC3Q8NFK1 279 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 OR8H1Q8NGG4 311 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 OR6N2Q8NGY6 317 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 C11orf40Q8WZ69 217 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 NABP1Q96AH0 204 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PIK3IP1Q96FE7 263 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 FOXN4Q96NZ1 517 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 TSSK2Q96PF2 358 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 IL4I1Q96RQ9 567 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 INTS14Q96SY0 518 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MBOAT4Q96T53 435 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 PITX2Q99697 317 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SEC22CQ9BRL7 303 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 NMNAT2Q9BZQ4 307 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF436Q9C0F3 470 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SRRQ9GZT4 340 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 ALX4Q9H161 411 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 GHITMQ9H3K2 345 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 HEXA-AS1Q9H8Q6 139 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MED20Q9H944 212 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 HINT3Q9NQE9 182 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms