RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TDGQ13569 410 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 PCK2Q16822 640 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 MYO7BQ6PIF6 2116 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF574Q6ZN55 896 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 GRINAQ7Z429 371 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 GALNTL5Q7Z4T8 443 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 PEG10Q86TG7 708 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 APCDD1LQ8NCL9 501 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 AKIRIN1Q9H9L7 192 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 FSCN3Q9NQT6 498 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 NME2P1O60361 137 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 CDC14BO60729 498 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 AHSA1O95433 338 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF14P17017 642 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 PAX6P26367 422 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 OR5AS1Q8N127 324 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 ARRDC1Q8N5I2 433 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 OR5D14Q8NGL3 314 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 MVB12AQ96EY5 273 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF319Q9P2F9 582 aa11.73□□□□□ -0.53
PDZRN3-208ENST00000479530 GDF9O60383 454 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 IGHMP01871 453 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 FPR2P25090 351 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 DHPSP49366 369 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 POU3F1Q03052 451 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF529Q6P280 563 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 LHFPL1Q86WI0 220 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 PLXDC1Q8IUK5 500 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 FAM24BQ8N5W8 94 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 OR5D18Q8NGL1 313 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ASB10Q8WXI3 467 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 C11orf40Q8WZ69 217 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ERGIC1Q969X5 290 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ANAPC10Q9UM13 185 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 C1QL1O75973 258 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 MT-ND4LP03901 98 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 AMY2BP19961 511 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 KLK2P20151 261 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 RPL12P30050 165 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 PTGER4P35408 488 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 TMEM33P57088 247 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 LCN10Q6JVE6 187 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ADAM5Q6NVV9 412 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 C5orf46Q6UWT4 87 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 COMMD2Q86X83 199 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF561Q8N587 486 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 RBM14Q96PK6 669 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 OR5B2Q96R09 309 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 KCNK17Q96T54 332 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 OSGIN2Q9Y236 505 aa11.72□□□□□ -0.53
PDZRN3-208ENST00000479530 M0R036 132 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 GATCO43716 136 aaKnown RBP11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 DUX1O43812 170 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 CRTAPO75718 401 aaPredicted RBP11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 IGHV2-5P01817 119 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 FCGR2CP31995 323 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF124Q15973 351 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 IAH1Q2TAA2 248 aaPredicted RBP11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 MIDNQ504T8 468 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 SCRT1Q9BWW7 348 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
PDZRN3-208ENST00000479530 NPIPA5E9PKD4 350 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 CST4P01036 141 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 ZNF17P17021 662 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 THBS4P35443 961 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 FOXF1Q12946 379 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 MFAP5Q13361 173 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 NCMAPQ5T1S8 102 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 Q7L0L9 218 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 C1QL2Q7Z5L3 287 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 TMEM59Q9BXS4 323 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 SPACA1Q9HBV2 294 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 EHFQ9NZC4 300 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 NPIPA1Q9UND3 350 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.54
PDZRN3-208ENST00000479530 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 A0A1B0GV50 99 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 K7EPK0 472 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 CHRM2P08172 466 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 RAB5AP20339 215 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 GSK3AP49840 483 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 SNU13P55769 128 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 RNF212Q495C1 297 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 CDCP2Q5VXM1 449 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 ABHD12BQ7Z5M8 362 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
PDZRN3-208ENST00000479530 STARD10Q9Y365 291 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms