RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PTTG3PQ9NZH4 202 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 STARD10Q9Y365 291 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 GCN1Q92616 2671 aaKnown RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 SMIM30A4D0T7 59 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 ATP6V1G2-DDX39BF2Z307 99 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 CASKO14936 926 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 MTRF1O75570 445 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 NCR1O76036 304 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 CLDN14O95500 239 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 KNG1P01042 644 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SRMP19623 302 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 CD40P25942 277 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 THBS4P35443 961 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 DDOSTP39656 456 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 MECP2P51608 486 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 OR10A3P58181 314 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 ERVS71-1P61550 626 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 PPP1CBP62140 327 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 MXD1Q05195 221 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SPOCK1Q08629 439 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 MALLQ13021 153 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 HNRNPA0Q13151 305 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 HLXQ14774 488 aaPredicted RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 CEP78Q5JTW2 689 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SPATA46Q5T0L3 261 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 TMEM42Q69YG0 159 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 XKRXQ6PP77 449 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 FBXW12Q6X9E4 464 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 UTS2BQ765I0 119 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 MRPL21Q7Z2W9 205 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 OR5AS1Q8N127 324 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SEMA6DQ8NFY4 1073 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 OR56B2PQ8NGI1 322 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 OR5L1Q8NGL2 311 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 ITFG2Q969R8 447 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 FGGYQ96C11 551 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 C10orf35Q96D05 121 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 LRRC46Q96FV0 321 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 ZC3HAV1LQ96H79 300 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 WFIKKN1Q96NZ8 548 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SLC30A2Q9BRI3 323 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 CHST5Q9GZS9 411 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 SLITRK2Q9H156 845 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 PLEKHA1Q9HB21 404 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 EIF3KQ9UBQ5 218 aaKnown RBP5.7□□□□□ -1.5
USP48-208ENST00000479177 CKLFQ9UBR5 152 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 FOXJ3Q9UPW0 622 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 PIGLQ9Y2B2 252 aa5.7□□□□□ -1.5
USP48-208ENST00000479177 AKAP6Q13023 2319 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 ZNF816-ZNF321PA0A0X1KG74 233 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 DPRXA6NFQ7 191 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 A6NIN4 97 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 CD300LBA8K4G0 201 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PDCD5O14737 125 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 SULT1B1O43704 296 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 MPIG6BO95866 241 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 CRYAAP02489 173 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 MAS1P04201 325 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 RAB3BP20337 219 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 TUBG1P23258 451 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PTAFRP25105 342 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 GNALP38405 381 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 RORCP51449 518 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 UCP2P55851 309 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 CAV3P56539 151 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PPP3R1P63098 170 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 NKX6-1P78426 367 aaPredicted RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 RIPPLY1Q0D2K3 151 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 SNTB2Q13425 540 aaKnown RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 DGUOKQ16854 277 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 TMEM255AQ5JRV8 349 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 SFXN4Q6P4A7 337 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 TMEM108Q6UXF1 575 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PGAP1Q75T13 922 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 KRT74Q7RTS7 529 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 SERPINA12Q8IW75 414 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 NKAIN3Q8N8D7 197 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 OR1M1Q8NGA1 313 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 OR51A2Q8NGJ7 313 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 OR1J1Q8NGS3 322 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 OR13C9Q8NGT0 318 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 SLC25A40Q8TBP6 338 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PP6455Q8WZ26 134 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PIGTQ969N2 578 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 MARS2Q96GW9 593 aaKnown RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 BCL2L14Q9BZR8 327 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 OR2J1Q9GZK6 312 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 NXF2Q9GZY0 626 aaKnown RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 TPK1Q9H3S4 243 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 TUBG2Q9NRH3 451 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 PLEKHB1Q9UF11 243 aaPredicted RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 AK6Q9Y3D8 172 aaKnown RBP5.69□□□□□ -1.5
USP48-208ENST00000479177 A3GALT2U3KPV4 340 aa5.69□□□□□ -1.5
USP48-208ENST00000479177 A0A075B6Q4 140 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 IGKV1-9A0A0C4DH69 117 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 GGT3PA6NGU5 568 aa5.68□□□□□ -1.5
USP48-208ENST00000479177 ANXA2P2A6NMY6 339 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms