RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 RNH1P13489 461 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 RPS2P15880 293 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 OR1E1P30953 314 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF133P52736 654 aaPredicted RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 AP3M2P53677 418 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 PLA2G16P53816 162 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SNRPFP62306 86 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SLC35A2P78381 396 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 EMX1Q04741 257 aaPredicted RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 CHRNB3Q05901 458 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 PJVKQ0ZLH3 352 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 MRPL28Q13084 256 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 RCAN2Q14206 197 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 LIN52Q52LA3 116 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 TMEM205Q6UW68 189 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 IZUMO2Q6UXV1 221 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 CCDC80Q76M96 950 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 GRAMD2AQ8IUY3 354 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 CLDND2Q8NHS1 167 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 CMTM5Q96DZ9 223 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 RILPQ96NA2 401 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SERPINB11Q96P15 392 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 EBF4Q9BQW3 602 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SPATA16Q9BXB7 569 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 FRMD8P1Q9BZ68 369 aaPredicted RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 NXF5Q9H1B4 397 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 LRRC19Q9H756 370 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 FARSBQ9NSD9 589 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 NMRK1Q9NWW6 199 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 RAB20Q9NX57 234 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 COX16Q9P0S2 106 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 ZMAT5Q9UDW3 170 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 DNAJC12Q9UKB3 198 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 DNAH5Q8TE73 4624 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 NCKAP5O14513 1909 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 IGHV2-70DA0A0C4DH43 119 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 A0A0G2JND7 137 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF816-ZNF321PA0A0X1KG74 233 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 PPIAL4DF5H284 164 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 OR1F1O43749 312 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 TNFAIP8O95379 198 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 H2BFMP0C1H6 154 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 UBTFL6P0CB48 400 aaPredicted RBP3.31□□□□□ -1.88
CCDC171-207ENST00000478913 IDO1P14902 403 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 TAC1P20366 129 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 CCNCP24863 283 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 HPCAL1P37235 193 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 RPL5P46777 297 aaKnown RBP3.31□□□□□ -1.88
CCDC171-207ENST00000478913 DNASE1L1P49184 302 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 HSD17B7P56937 341 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 RHOAP61586 193 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 CDK16Q00536 496 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 LRRC74AQ0VAA2 488 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 ENPP6Q6UWR7 440 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 UNQ9370/PRO34162Q6UXP9 181 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 IL34Q6ZMJ4 242 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 TAC4Q86UU9 113 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 TPRA1Q86W33 373 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 LRRC6Q86X45 466 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 CCDC71LQ8N9Z2 235 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 STXBP6Q8NFX7 210 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 OR52I1Q8NGK6 324 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 OR5L2Q8NGL0 311 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 PYROXD1Q8WU10 500 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 NAT14Q8WUY8 206 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 SPRYD4Q8WW59 207 aaPredicted RBP3.31□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF75CPQ92670 426 aaPredicted RBP3.31□□□□□ -1.88
CCDC171-207ENST00000478913 COX14Q96I36 57 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 CYTH2Q99418 400 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 ECSITQ9BQ95 431 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 MRPS26Q9BYN8 205 aaKnown RBP3.31□□□□□ -1.88
CCDC171-207ENST00000478913 ACTR6Q9GZN1 396 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 NANOGQ9H9S0 305 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 AP4S1Q9Y587 144 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 SNX10Q9Y5X0 201 aa3.31□□□□□ -1.88
CCDC171-207ENST00000478913 NEBP20929 6669 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TSPAN11A1L157 253 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 E7ESA3 106 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 LYNX1G3V0Z9 82 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 J3QLI3 93 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 K7EPI3 171 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 BTN3A3O00478 584 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 COPEO14579 308 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PSTPIP1O43586 416 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PRKYO43930 277 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ENTPD5O75356 428 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 SUPT7LO94864 414 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 MPZL1O95297 269 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PABPC4LP0CB38 370 aaKnown RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 LYNX1P0DP58 116 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 NR2C1P13056 603 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF7P17097 686 aaPredicted RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 CNR1P21554 472 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 NT5EP21589 574 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 CCR1P32246 355 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PRKXP51817 358 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 RAP1GDS1P52306 607 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms