RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DIDO1Q9BTC0 2240 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF462Q96JM2 2506 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR51F1A6NGY5 319 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 C9J4A7 227 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 E5RI56 91 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 E7EQ34 232 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCL22O00626 93 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 PSIP1O75475 530 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 SUPT7LO94864 414 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CATP04040 527 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 P04436 131 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FOLR1P15328 257 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 UGT2B7P16662 529 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 PGAM1P18669 254 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TCN2P20062 427 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 HTR1EP28566 365 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRDX3P30048 256 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 PEBP1P30086 187 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCR7P32248 378 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RORAP35398 523 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 NUP107P57740 925 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 VSNL1P62760 191 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RELAQ04206 551 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 SRSF6Q13247 344 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CAPRIN1Q14444 709 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 HERPUD1Q15011 391 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 LINC00303Q3SY05 128 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPANXN3Q5MJ09 141 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 AGBL2Q5U5Z8 902 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 STEAP4Q687X5 459 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 PTRHD1Q6GMV3 140 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM45BPQ6NSW5 357 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 C1orf94Q6P1W5 598 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TTC23LQ6PF05 361 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 METAP1DQ6UB28 335 aaPredicted RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 C6orf89Q6UWU4 347 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM107Q6UX40 140 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 LRRC74BQ6ZQY2 392 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM92BQ6ZTR7 304 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RAB43Q86YS6 212 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 OTUD6BQ8N6M0 293 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR5AR1Q8NGP9 310 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 KCNG3Q8TAE7 436 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RAB3IL1Q8TBN0 382 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM45AQ8TCE6 357 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CT55Q8WUE5 264 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 LCN9Q8WX39 176 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 DCUN1D4Q92564 292 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 MAGOHBQ96A72 148 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RAD51AP1Q96B01 352 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FCRL1Q96LA6 429 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF285Q96NJ3 590 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 CTRCQ99895 268 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM246Q9BRR3 403 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM109Q9BVC6 243 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 GPR61Q9BZJ8 451 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 STMN4Q9H169 189 aaPredicted RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 DEFB127Q9H1M4 99 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM96AQ9H5X1 160 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 RNF167Q9H6Y7 350 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 HRASLS2Q9NWW9 162 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 QPCTLQ9NXS2 382 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 KLHL28Q9NXS3 571 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 ANAPC11Q9NYG5 84 aa2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 NXT1Q9UKK6 140 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-212ENST00000478573 BOD1L1Q8NFC6 3051 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SMG1Q96Q15 3661 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 A0A1B0GX78 115 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 GOLGA6L10A6NI86 522 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 A8MUA0 341 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 C12orf77C9JDV5 145 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 MKRN2OSH3BPM6 223 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NDUFAB1O14561 156 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR1I1O60431 355 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NIPSNAP2O75323 286 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 VAPBO95292 243 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ACTL6AO96019 429 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 IGHV2-5P01817 119 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 C8GP07360 202 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CHTF8P0CG12 524 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NEFHP12036 1026 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ICAM2P13598 275 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ELK1P19419 428 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 MAGP20916 626 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 FUT3P21217 361 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CMPK1P30085 196 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC1A2P43004 574 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 VDAC2P45880 294 aaPredicted RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CAV2P51636 162 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCNG1P51959 295 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SH3BGRP55822 239 aaPredicted RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 AP1S2P56377 157 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 WNT4P56705 351 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPS15P62841 145 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 KCNJ2P63252 427 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CRADDP78560 199 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NCF4Q15080 339 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 PPP1R7Q15435 360 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms