RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CLVS2Q5SYC1 327 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 C6orf141Q5SZD1 244 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 SFRP4Q6FHJ7 346 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 FDX2Q6P4F2 183 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 C11orf53Q8IXP5 236 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 C1orf87Q8N0U7 546 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 STX19Q8N4C7 294 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 KLHL36Q8N4N3 616 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF676Q8N7Q3 588 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 OR51A4Q8NGJ6 313 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 NPRL2Q8WTW4 380 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 SGCDQ92629 289 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 RPL3LQ92901 407 aaKnown RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ERGIC1Q969X5 290 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 CNBD2Q96M20 576 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 MYCBPQ99417 103 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 PDCD1LG2Q9BQ51 273 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ANKRD60Q9BZ19 345 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ABCB9Q9NP78 766 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 RNF7Q9UBF6 113 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 PCDHB10Q9UN67 800 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 MTORP42345 2549 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PPIAL4EA0A075B759 164 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 IGHV3OR15-7A0A075B7D8 119 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 ANKRD61A6NGH8 418 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 OR4C45A6NMZ5 311 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CEACAM18A8MTB9 384 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PTGES3LE9PB15 166 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PPIAL4DF5H284 164 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 ZFPL1O95159 310 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 LALBAP00709 142 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PPIAL4FP0DN26 164 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 MYF6P23409 242 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 C21orf33P30042 268 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CCR9P51686 369 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CDH15P55291 814 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 SEC61A1P61619 476 aaKnown RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 MED21Q13503 144 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CEACAM21Q3KPI0 293 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 ZBTB37Q5TC79 503 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM244Q5VVB8 128 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 FAM166AQ6J272 317 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 WDR82Q6UXN9 313 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TMPRSS11AQ6ZMR5 421 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 Q6ZSR3 168 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 LRRC28Q86X40 367 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 SPICQ8N5J4 248 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 LINC01356Q8N9X3 169 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TRMT10AQ8TBZ6 339 aaKnown RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 LRRC29Q8WV35 223 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 RAB39BQ96DA2 213 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 SEH1LQ96EE3 360 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 ADAT3Q96EY9 351 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM246Q9BRR3 403 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PLCXD1Q9NUJ7 323 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CNOT2Q9NZN8 540 aaKnown RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 ERVK-18Q9QC07 812 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 CAB39Q9Y376 341 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PPIAL4AQ9Y536 164 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 PCDHGB5Q9Y5G0 923 aa8.61□□□□□ -1.03
HDAC6-222ENST00000478095 TRBV2A0A0J9YWF9 115 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 PNMA8CA0A1B0GUJ8 204 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 FAM230AA0A1W2PPH8 454 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM210A6NLX4 147 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 DHRS7CA6NNS2 312 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 A8MV72 311 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 B4DSR2 109 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 MYL12BO14950 172 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 RHBDL1O75783 438 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 MSMBP08118 114 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 RPS2P15880 293 aaKnown RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF20P17024 532 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 GNG3P63215 75 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 LCN2P80188 198 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 MRPL28Q13084 256 aaKnown RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 DOC2BQ14184 412 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 CDK5R1Q15078 307 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF404Q494X3 552 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM155Q4W5P6 130 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM42Q69YG0 159 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 HAGHLQ6PII5 290 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 LYPD2Q6UXB3 125 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 KRT74Q7RTS7 529 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 MUC20Q8N307 709 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 ZFP41Q8N8Y5 198 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 SCCPDHQ8NBX0 429 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 OR5A2Q8NGI9 324 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 OR13C3Q8NGS6 347 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 OR5AK2Q8NH90 309 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 FGGYQ96C11 551 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 COMMD4Q9H0A8 199 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 TLNRD1Q9H1K6 362 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms