RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CLDN15P56746 228 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 TAS2R46P59540 309 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 MICBQ29980 383 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 OR52W1Q6IF63 320 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 CD163Q86VB7 1156 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 SCARB1Q8WTV0 552 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 TIMM10BQ9Y5J6 103 aa10.67□□□□□ -0.7
PTPRF-212ENST00000477970 CXCL13O43927 109 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 RAD51DO75771 328 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 PRKACBP22694 351 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 MPGP29372 298 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 NTF4P34130 210 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 CNN3Q15417 329 aaKnown RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SURF2Q15527 256 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ADAMTS17Q8TE56 1095 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 IP6K3Q96PC2 410 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SPACA5Q96QH8 159 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 FN3KRPQ9HA64 309 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 GPR132Q9UNW8 380 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 MASP2O00187 686 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 RRP8O43159 456 aaKnown RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 MGMTP16455 207 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ZNF24P17028 368 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 FPR2P25090 351 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ECI1P42126 302 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SLC22A6Q4U2R8 563 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ARHGAP5-AS1Q96IT6 56 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 PECRQ9BY49 303 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 CRLF2Q9HC73 371 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 GPR35Q9HC97 309 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 RPL36A-HNRNPH2H7BZ11 118 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ARPC5O15511 151 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 FAHP16930 419 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SNAI3Q3KNW1 292 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 WIPI1Q5MNZ9 446 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 GSG1LQ6UXU4 331 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 SLC51BQ86UW2 128 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 OR51T1Q8NGJ9 327 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 FOXB1Q99853 325 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 BANF2Q9H503 90 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ZNF703Q9H7S9 590 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-212ENST00000477970 IL36GQ9NZH8 169 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 ABI3Q9P2A4 366 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 HSF4Q9ULV5 492 aa10.66□□□□□ -0.7
PTPRF-212ENST00000477970 NCOA6Q14686 2063 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-212ENST00000477970 CEP250Q9BV73 2442 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 MED19A0JLT2 244 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-212ENST00000477970 PINLYPA6NC86 204 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 NEURL1O76050 574 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OR2F2O95006 317 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 GDF1P27539 372 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OR2F1Q13607 317 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 DTX1Q86Y01 620 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OR2M7Q8NG81 312 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 SPSB4Q96A44 273 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 THOC3Q96J01 351 aaKnown RBP10.65□□□□□ -0.7
PTPRF-212ENST00000477970 Q96M66 194 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 B4GALT7Q9UBV7 327 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 NOP16Q9Y3C1 178 aaKnown RBP10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OR5H14A6NHG9 310 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 STMND1H3BQB6 276 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 FCGR2AP12318 317 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 SORDQ00796 357 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 TMEM128Q5BJH2 165 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 TMEM164Q5U3C3 297 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 LHFPL2Q6ZUX7 228 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 WBP1Q96G27 269 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 REEP6Q96HR9 211 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 LRFN1Q9P244 771 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 OSGIN2Q9Y236 505 aa10.65□□□□□ -0.7
PTPRF-212ENST00000477970 FXYD6-FXYD2A0A087WZ82 144 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 PMP2P02689 132 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 DBHP09172 617 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 UBA52P62987 128 aaKnown RBP10.64□□□□□ -0.71
PTPRF-212ENST00000477970 IL13RA1P78552 427 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 HYAL4Q2M3T9 481 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 TMPRSS7Q7RTY8 843 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 C1QL2Q7Z5L3 287 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 COMMD7Q86VX2 200 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 OR5H2Q8NGV7 314 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 MFFQ9GZY8 342 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 FXYD6Q9H0Q3 95 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 WNT5BQ9H1J7 359 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 MMP7P09237 267 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF32P17041 273 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 LHX2P50458 406 aa10.64□□□□□ -0.71
PTPRF-212ENST00000477970 OR8B8Q15620 311 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms