RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CLDN6P56747 220 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 CLDN18P56856 261 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 PAFAH1B2P68402 229 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ADIGQ0VDE8 80 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ZNF235Q14590 738 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 TSC22D1Q15714 1073 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 C5orf64Q2M2E5 130 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ZNF678Q5SXM1 525 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 HHATQ5VTY9 493 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 MLIPQ5VWP3 458 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 PDPNQ86YL7 162 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ZNF664Q8N3J9 261 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 WDR31Q8NA23 367 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 SLC26A10Q8NG04 563 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 OR52K2Q8NGK3 314 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 GLYATL2Q8WU03 294 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ING5Q8WYH8 240 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 HGDQ93099 445 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 Q96MT0 163 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 CSPG4P5Q96PW8 444 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 TM2D3Q9BRN9 247 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 TBL1XR1Q9BZK7 514 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 CLSTN2Q9H4D0 955 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 C8orf33Q9H7E9 229 aaPredicted RBP1.55□□□□□ -2.16
TARDBP-208ENST00000477447 CA10Q9NS85 328 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 PPIL1Q9Y3C6 166 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ADGRA3Q8IWK6 1321 aa1.55□□□□□ -2.16
TARDBP-208ENST00000477447 ARPC4-TTLL3A0A0A6YYG9 625 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 A0A0B4J2E0 115 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 IGKV1-6A0A0C4DH72 117 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TMEM72A0PK05 275 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 H3BN98 237 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 BOLA2-SMG1P6H3BVE0 249 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TRDMT1O14717 391 aaKnown RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TTC4O95801 387 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 NRASP01111 189 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 HRASP01112 189 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 KRASP01116 189 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 IGKV1-39P01597 117 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 IGHV1-46P01743 117 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 IGKV1D-39P04432 117 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 PMCHP20382 165 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 CASQ1P31415 396 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 YWHAEP62258 255 aaKnown RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 RAB11AP62491 216 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 GRB2P62993 217 aaKnown RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 MAPRE2Q15555 327 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 RAB11BQ15907 218 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 DEFB134Q4QY38 66 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TMEM69Q5SWH9 247 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TPRG1LQ5T0D9 272 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 ULK3Q6PHR2 472 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 PROKR2Q8NFJ6 384 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 ZNF420Q8TAQ5 688 aaPredicted RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 PIH1D2Q8WWB5 315 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 NAT6Q93015 286 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 YIPF6Q96EC8 236 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 CERS2Q96G23 380 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 PDCD1LG2Q9BQ51 273 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 ARV1Q9H2C2 271 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 SND1-IT1Q9HBX3 110 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 ZNF492Q9P255 531 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 SLC22A7Q9Y694 548 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 ENPP4Q9Y6X5 453 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 PHLPP2Q6ZVD8 1323 aa1.54□□□□□ -2.16
TARDBP-208ENST00000477447 RPRD2Q5VT52 1461 aaKnown RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 BAZ2AQ9UIF9 1905 aaKnown RBP1.54□□□□□ -2.16
TARDBP-208ENST00000477447 TRAV8-6A0A0B4J262 113 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 A0A0G2JMP0 313 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 A0A0X1KG70 313 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 AKR7A2O43488 359 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 LCA5LO95447 670 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 GCGP01275 180 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 INAFM2P0DMQ5 153 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 SFTPCP11686 197 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 HRES1P13985 223 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 HLA-DMAP28067 261 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 ARL2P36404 184 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 CD151P48509 253 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 PSMD4P55036 377 aaKnown RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 SLC35A1P78382 337 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 IHHQ14623 411 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 PIP5KL1Q5T9C9 394 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 THOC7Q6I9Y2 204 aaKnown RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 MORN3Q6PF18 240 aaPredicted RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 LINC00336Q6ZUF6 198 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 TMCO2Q7Z6W1 182 aaPredicted RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 LRRC8AQ8IWT6 810 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 CYB561A3Q8NBI2 242 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 AGR3Q8TD06 166 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 SMARCD1Q96GM5 515 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 ZBED3Q96IU2 234 aaPredicted RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 CFAP53Q96M91 514 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 NAPGQ99747 312 aaPredicted RBP1.53□□□□□ -2.16
TARDBP-208ENST00000477447 MS4A8Q9BY19 250 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 OR51B5Q9H339 312 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 FANCEQ9HB96 536 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 PRSS16Q9NQE7 514 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 TAS2R1Q9NYW7 299 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms