RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 RAMP1O60894 148 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 GPANK1O95872 356 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 IL3P08700 152 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ST6GAL1P15907 406 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CELP19835 753 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 AK4P27144 223 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 PSMB4P28070 264 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SSTR5P35346 364 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CDKN1AP38936 164 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 GPR6P46095 362 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 RND2P52198 227 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ATP1B3P54709 279 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SRPXP78539 464 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 COL10A1Q03692 680 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SMAGPQ0VAQ4 97 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 GNMTQ14749 295 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 C5orf47Q569G3 176 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 NIPAL3Q6P499 406 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TOMM20LQ6UXN7 152 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 C15orf39Q6ZRI6 1047 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 HFE2Q6ZVN8 426 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 KLHDC8AQ8IYD2 350 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 C20orf196Q8IYI0 205 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 NHLRC2Q8NBF2 726 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CHST4Q8NCG5 386 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF485Q8NCK3 441 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SMPDL3BQ92485 455 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 NDRG1Q92597 394 aaKnown RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 HAVCR1Q96D42 359 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SDSLQ96GA7 329 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 RAX2Q96IS3 184 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CCDC140Q96MF4 163 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF582Q96NG8 517 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 MS4A10Q96PG2 267 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF649Q9BS31 505 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 OR11A1Q9GZK7 315 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ALG9Q9H6U8 611 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SRD5A3Q9H8P0 318 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 NOX4Q9NPH5 578 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 GPR27Q9NS67 375 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PLA2G3Q9NZ20 509 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF107Q9UII5 783 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 FBXW11Q9UKB1 542 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 FUT9Q9Y231 359 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 UBE2J1Q9Y385 318 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 MRPS16Q9Y3D3 137 aaKnown RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 TRPM7Q96QT4 1865 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TSC2P49815 1807 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TRBV6-7A0A0A0MS04 114 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SMIM35A0A1B0GVV1 85 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TLCD2A6NGC4 264 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ARL5CA6NH57 179 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF860A6NHJ4 632 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 HEPACAM2A8MVW5 462 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 H3BQ15 152 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TAAR5O14804 337 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PCDH7O60245 1069 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF354AO60765 605 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 LRP3O75074 770 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CNMDO75829 334 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CDS2O95674 445 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 THY1P04216 161 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CSN2P05814 226 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SMIM17P0DL12 118 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 CD40P25942 277 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 NMBRP28336 390 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PTH2RP49190 550 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PLP1P60201 277 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 RPL23AP62750 156 aaKnown RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 PAFAH1B2P68402 229 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PMPCAQ10713 525 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 MALLQ13021 153 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF154Q13106 437 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 RGNQ15493 299 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SGCBQ16585 318 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SRSF7Q16629 238 aaKnown RBP eCLIP3.68□□□□□ -1.82
CD55-208ENST00000476590 ALKBH6Q3KRA9 238 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 FAM174BQ3ZCQ3 159 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 LRRC37A5PQ49AS3 106 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PHYHD1Q5SRE7 291 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 PRAMEF17Q5VTA0 474 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 Q6ZVH6 145 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 LRRC70Q7Z2Q7 622 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 OR8I2Q8N0Y5 310 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 ZNF567Q8N184 647 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TCEANCQ8N8B7 351 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 LFNGQ8NES3 379 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 OR4D9Q8NGE8 314 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 OR2Y1Q8NGV0 311 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 MFSD8Q8NHS3 518 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 RHEBL1Q8TAI7 183 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 DCUN1D4Q92564 292 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 DAZAP1Q96EP5 407 aaKnown RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 TVP23CQ96ET8 276 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 IMMP2LQ96T52 175 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 SLC25A21Q9BQT8 299 aaPredicted RBP3.68□□□□□ -1.82
CD55-208ENST00000476590 WDR54Q9H977 334 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 GPATCH2Q9NW75 528 aa3.68□□□□□ -1.82
CD55-208ENST00000476590 TMEM242Q9NWH2 141 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms