RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C19orf47Q8N9M1 422 aaKnown RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 OR56B1Q8NGI3 324 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 TSEN15Q8WW01 171 aaKnown RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC41A2Q96JW4 573 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 PHB2Q99623 299 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 MRI1Q9BV20 369 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 S1PR5Q9H228 398 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC2A8Q9NY64 477 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 B9D1Q9UPM9 204 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 STK17BO94768 372 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 CYC1P08574 325 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 CTLA4P16410 223 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 KLK2P20151 261 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 DVL1P1P54792 670 aaPredicted RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 ROM1Q03395 351 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC17A1Q14916 467 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 HEPN1Q6WQI6 88 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 ZNF596Q8TC21 504 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SPACA9Q96E40 222 aaPredicted RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 RARRES2Q99969 163 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 G6PC2Q9NQR9 355 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 PLSCR4Q9NRQ2 329 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC35D1Q9NTN3 355 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 UPB1Q9UBR1 384 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 HDGFL3Q9Y3E1 203 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 IGKV3D-11A0A0A0MRZ8 115 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 TMEM212A6NML5 194 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 AHRRA9YTQ3 701 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 OR2C1O95371 312 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 DDAH2O95865 285 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 F10P00742 488 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 HLA-DOBP13765 273 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 TACR3P29371 465 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 DMRTC1Q5HYR2 192 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 TMEM225Q6GV28 225 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 TMEM108Q6UXF1 575 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 CATSPERDQ86XM0 798 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 OR6N2Q8NGY6 317 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ZNF721Q8TF20 911 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 CMKLR1Q99788 373 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 SLC25A21Q9BQT8 299 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 Q9N2J8 555 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 PARPBPQ9NWS1 579 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 CLEC1BQ9P126 229 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 PPP4R1LQ9P1A2 415 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 A6NNC1 897 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ZNF354AO60765 605 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 TRGC2P03986 189 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 GABRG2P18507 467 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 VAMP2P63027 116 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 SPOCK1Q08629 439 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 EMC4Q5J8M3 183 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 THNSL2Q86YJ6 484 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 C17orf78Q8N4C9 275 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 RNF128Q8TEB7 428 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 Q8WTZ3 238 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 MYOZ1Q9NP98 299 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 CNTRLQ7Z7A1 2325 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 RTTNQ86VV8 2226 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 SRPX2O60687 465 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 ZNF432O94892 652 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 UTS2O95399 124 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 CAMLGP49069 296 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 NPY4RP50391 375 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 PMPCAQ10713 525 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 UNC119Q13432 240 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 RAB11BQ15907 218 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 CRIP3Q6Q6R5 217 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 OR10AD1Q8NGE0 317 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.41□□□□□ -1.22
VAPB-205ENST00000476395 PTGES2Q9H7Z7 377 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 ELOVL3Q9HB03 270 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 TAS2R4Q9NYW5 299 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 STARD10Q9Y365 291 aa7.41□□□□□ -1.22
VAPB-205ENST00000476395 KNL1Q8NG31 2342 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 ACTBP60709 375 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 ACTG1P63261 375 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 ZP2Q05996 745 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 GUK1Q16774 197 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 LPCAT3Q6P1A2 487 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 S100A7AQ86SG5 101 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 C9orf40Q8IXQ3 194 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 PRR22Q8IZ63 422 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 TMEM229BQ8NBD8 167 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 OR4D6Q8NGJ1 314 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 EDAQ92838 391 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 GNRHR2Q96P88 292 aa7.4□□□□□ -1.22
VAPB-205ENST00000476395 TPSD1Q9BZJ3 242 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms