RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 MUC6Q6W4X9 2439 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF850A8MQ14 1090 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 RPL36A-HNRNPH2H7BZ11 118 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 K7EMT4 169 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 M0QZ92 97 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 DNASE2O00115 360 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CDH16O75309 829 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 REM1O75628 298 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 IGLV3-19P01714 112 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 IL4P05112 153 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CD5P06127 495 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 OR1E1P30953 314 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 MRPL19P49406 292 aaKnown RBP2.7□□□□□ -1.98
PTCD3-211ENST00000476215 SYNJ2BPP57105 145 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CACNG7P62955 275 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 PRR3P79522 188 aaKnown RBP2.7□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF816Q0VGE8 651 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-211ENST00000476215 PGGHGQ32M88 737 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CHRFAM7AQ494W8 412 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 TMEM31Q5JXX7 168 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 SPANXN2Q5MJ10 180 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 MBOAT2Q6ZWT7 520 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 SLC16A13Q7RTY0 426 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 LYPD1Q8N2G4 141 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CBR4Q8N4T8 237 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 OR11H7Q8NGC8 314 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 OR6N1Q8NGY5 312 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 OR5K2Q8NHB8 316 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 OR51E1Q8TCB6 317 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 CCDC12Q8WUD4 166 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-211ENST00000476215 ANKRD60Q9BZ19 345 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 BEX1Q9HBH7 125 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF302Q9NR11 478 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 RGS18Q9NS28 235 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 LRRC37A2A6NM11 1700 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 MYH6P13533 1939 aa2.7□□□□□ -1.98
PTCD3-211ENST00000476215 FRYLO94915 3013 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 IGLV3-12A0A075B6K2 115 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 A0A075B6Q4 140 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 IGKV1D-17A0A075B6S4 117 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 C5orf63A6NC05 138 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 NCBP2LA6PVI3 153 aaKnown RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 H0YJW9 148 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 SOCS1O15524 211 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 OR2F2O95006 317 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 SEMA3DO95025 777 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 IGKV1-17P01599 117 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 IL9P15248 144 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 SYKP43405 635 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 RPS23P62266 143 aaKnown RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 RPS15P62841 145 aaKnown RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 CDK5Q00535 292 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF266Q14584 549 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 KIR2DS1Q14954 304 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 MPV17L2Q567V2 206 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 AP1ARQ63HQ0 302 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 METAP1DQ6UB28 335 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 NKAIN4Q8IVV8 208 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 FAM71AQ8IYT1 594 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 OSR2Q8N2R0 312 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 SNX31Q8N9S9 440 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 PRRC1Q96M27 445 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 MBOAT7Q96N66 472 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 TIMM29Q9BSF4 260 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 UPF3BQ9BZI7 483 aaKnown RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 ACTR3CQ9C0K3 210 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 FGF23Q9GZV9 251 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 AGPAT4Q9NRZ5 378 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 LYARQ9NX58 379 aaKnown RBP2.69□□□□□ -1.98
PTCD3-211ENST00000476215 GINS2Q9Y248 185 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 LAMA4Q16363 1823 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 COL1A2P08123 1366 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 GBF1Q92538 1859 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF292O60281 2723 aa2.69□□□□□ -1.98
PTCD3-211ENST00000476215 ADGRA3Q8IWK6 1321 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 RIF1Q5UIP0 2472 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 SPTBN4Q9H254 2564 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 VPS13AQ96RL7 3174 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 PTPRZ1P23471 2315 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 LOC730098B7Z3J9 87 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 H7C0C1 242 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CHST10O43529 356 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CHMP2AO43633 222 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 SLC22A5O76082 557 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 AQP8O94778 261 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 DEXIO95424 95 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 LSM8O95777 96 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 DCNP07585 359 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF688P0C7X2 276 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CD37P11049 281 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 IL32P24001 234 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 RBM34P42696 430 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 UQCRFS1P47985 274 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 ATP5OP48047 213 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 PSMC5P62195 406 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CRADDP78560 199 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 SEMG2Q02383 582 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 MERTKQ12866 999 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms