RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ELL3Q9HB65 397 aaPredicted RBP11.43□□□□□ -0.58
CCDC78-209ENST00000474647 BRD7Q9NPI1 651 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 HAO2Q9NYQ3 351 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 CDH10Q9Y6N8 788 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 NOTCH3Q9UM47 2321 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 DNAH3Q8TD57 4116 aa11.43□□□□□ -0.58
CCDC78-209ENST00000474647 hCG_38984A0A1B0GV85 526 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 ANXA2P2A6NMY6 339 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 H3BNX3 289 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 ANGPTL7O43827 346 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 PAX6P26367 422 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 SLC15A1P46059 708 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 TGM4P49221 684 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 GSK3AP49840 483 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 ACSM1Q08AH1 577 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 EIF2B1Q14232 305 aaKnown RBP11.42□□□□□ -0.58
CCDC78-209ENST00000474647 DGUOKQ16854 277 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 RPL13AP3Q6NVV1 102 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 KCTD8Q6ZWB6 473 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 SGK3Q96BR1 496 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 ITPKCQ96DU7 683 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 MICU1Q9BPX6 476 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 RTL8AQ9BWD3 113 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 FAM234AQ9H0X4 552 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 METTL8Q9H825 291 aaKnown RBP11.42□□□□□ -0.58
CCDC78-209ENST00000474647 TBC1D23Q9NUY8 699 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 RHBDD3Q9Y3P4 386 aa11.42□□□□□ -0.58
CCDC78-209ENST00000474647 H0YAE9 185 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 M0R1W7 72 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 AKR7A2O43488 359 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 CST1P01037 141 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 CLUP10909 449 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 FCGR1AP12314 374 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 GABRA2P47869 451 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 ZNF121P58317 390 aaPredicted RBP11.41□□□□□ -0.58
CCDC78-209ENST00000474647 IL5RAQ01344 420 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 CRMP1Q14194 572 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR2T5Q6IEZ7 315 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 C11orf88Q6PI97 169 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 ZNF788Q6ZQV5 615 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 FAM185AQ8N0U4 392 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 FTMTQ8N4E7 242 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 CSNK2A3Q8NEV1 391 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR9Q2Q8NGE9 314 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR8D4Q8NGM9 314 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR2T29Q8NH02 315 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 SGCDQ92629 289 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 STMN2Q93045 179 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 MED30Q96HR3 178 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
CCDC78-209ENST00000474647 DNTTIP1Q9H147 329 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 TLNRD1Q9H1K6 362 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 OR10A2Q9H208 303 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 S100A14Q9HCY8 104 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 MAB21L2Q9Y586 359 aa11.41□□□□□ -0.58
CCDC78-209ENST00000474647 ZNF850A8MQ14 1090 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 KRT36O76013 467 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 SPI1P17947 270 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
CCDC78-209ENST00000474647 KIR2DS4P43632 304 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 PRDX4Q13162 271 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 GK3PQ14409 553 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 ATP6AP1Q15904 470 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 KLHL12Q53G59 568 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 ATPAF1Q5TC12 328 aaPredicted RBP11.4□□□□□ -0.58
CCDC78-209ENST00000474647 ERI1Q8IV48 349 aaKnown RBP11.4□□□□□ -0.58
CCDC78-209ENST00000474647 TMEM185AQ8NFB2 350 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 OR10Z1Q8NGY1 313 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 CFHR4Q92496 578 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 DDOQ99489 341 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 SP140LQ9H930 580 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 VNN3Q9NY84 501 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
CCDC78-209ENST00000474647 LYVE1Q9Y5Y7 322 aa11.4□□□□□ -0.58
CCDC78-209ENST00000474647 TMEM210A6NLX4 147 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 H0YHG0 523 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 SIGLEC5O15389 551 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 FBXO24O75426 580 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 APOC1P02654 83 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 GLRA1P23415 457 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 FASP25445 335 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 CAPZA1P52907 286 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 SNCBQ16143 134 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 ZBTB37Q5TC79 503 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 ZNRF1Q8ND25 227 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 OR52H1Q8NGJ2 320 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 OR5D13Q8NGL4 314 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 ANGPTL6Q8NI99 470 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 PIGCQ92535 297 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 TSSK6Q9BXA6 273 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms