RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLVS2Q5SYC1 327 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 TTC23Q5W5X9 447 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 DHRSXQ8N5I4 330 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 SCCPDHQ8NBX0 429 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 VCXQ9H320 206 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ACOXLQ9NUZ1 547 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ERICH4A6NGS2 130 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 A6NIN4 97 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 OR5B21A6NL26 309 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 TRAPPC2LH3BP13 241 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 LHBP01229 141 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 HTR1AP08908 422 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 MUC1P15941 1255 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-203ENST00000474047 GABRB1P18505 474 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 PEX2P28328 305 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 NPY4RP50391 375 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 KLHL22Q53GT1 634 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 LHFPL3Q86UP9 236 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 HPSE2Q8WWQ2 592 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 GPR173Q9NS66 373 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-203ENST00000474047 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 V9GYS6 101 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
VAMP4-203ENST00000474047 A0A1B0GTI1 187 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 TMPRSS2O15393 492 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 AVPP01185 164 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF12P17014 697 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 EGR1P18146 543 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 ADRA2CP18825 462 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 OR12D2P58182 307 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 RAB40BQ12829 278 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 WDR38Q5JTN6 314 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 WDR25Q64LD2 544 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-203ENST00000474047 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 OR14K1Q8NGZ2 314 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 RAB40AQ8WXH6 277 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 DHRS7CA6NNS2 312 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 J3QRE1 110 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 DLGAP1O14490 977 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 AKR7A2O43488 359 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 SERPINA3P01011 423 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
VAMP4-203ENST00000474047 CFHR2P36980 270 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 GALEQ14376 348 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 ARMCX4Q5H9R4 360 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 FAM76BQ5HYJ3 339 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 CD276Q5ZPR3 534 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 HAGHLQ6PII5 290 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-203ENST00000474047 SLC36A1Q7Z2H8 476 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 C1QL2Q7Z5L3 287 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 PRSS35Q8N3Z0 413 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 OR51I2Q9H344 312 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 SLC7A11Q9UPY5 501 aa11.86□□□□□ -0.51
VAMP4-203ENST00000474047 SRRM5B3KS81 715 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 TCF21O43680 179 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 CLIC3O95833 236 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 GLRA1P23415 457 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 TMEM244Q5VVB8 128 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 C1orf229Q6ZS94 237 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-203ENST00000474047 KRT74Q7RTS7 529 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF573Q86YE8 665 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 OR5T2Q8NGG2 359 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 OR2G2Q8NGZ5 317 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 CCL13Q99616 98 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 NUDT16L1Q9BRJ7 211 aaKnown RBP11.85□□□□□ -0.51
VAMP4-203ENST00000474047 RASSF4Q9H2L5 321 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 SNTG1Q9NSN8 517 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
VAMP4-203ENST00000474047 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 LOC107986453A0A1B0GWG9 222 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 IRGMA1A4Y4 181 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 ANKRD61A6NGH8 418 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 RNF212BA8MTL3 300 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
VAMP4-203ENST00000474047 GATBO75879 557 aaKnown RBP11.84□□□□□ -0.51
VAMP4-203ENST00000474047 EPHA1P21709 976 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 CCL1P22362 96 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 HAAOP46952 286 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 ISL1P61371 349 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF691Q5VV52 312 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 RDH10Q8IZV5 341 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 OR52I1Q8NGK6 324 aa11.84□□□□□ -0.51
VAMP4-203ENST00000474047 CNIH3Q8TBE1 160 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms