RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TRANK1O15050 2925 aa5.15□□□□□ -1.58
ATPAF1-204ENST00000474020 TP53BP1Q12888 1972 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-204ENST00000474020 USP34Q70CQ2 3546 aa5.15□□□□□ -1.58
ATPAF1-204ENST00000474020 IGKV1D-43A0A0B4J1Z2 117 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 A0A0D9SG52 128 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 KANTRA0A1W2PQU2 76 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR6C65A6NJZ3 312 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 DHRS7CA6NNS2 312 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SERPINE3A8MV23 424 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 C21orf140B9A014 251 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 F5H5K5 113 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 M0QYG6 137 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 M0R135 149 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 TNFSF11O14788 317 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 RER1O15258 196 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CRTAPO75718 401 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 KLF7O75840 302 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 TRAPPC6AO75865 159 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 DHRS3O75911 302 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SYNGR4O95473 234 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 HLA-AP01891 365 aaKnown RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SLPIP03973 132 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CSN2P05814 226 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CST2P09228 141 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR4E1P0C645 316 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CCL3P10147 92 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF35P13682 527 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 TCN2P20062 427 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CPT2P23786 658 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 GDF1P27539 372 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 S100A11P31949 105 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CDAP32320 146 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 MPLP40238 635 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 P2RY4P51582 365 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF133P52736 654 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SEC61A1P61619 476 aaKnown RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CHAF1BQ13112 559 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 MFAP5Q13361 173 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 GRK1Q15835 563 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 HIST3H3Q16695 136 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF260Q3ZCT1 412 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CLLU1Q5K131 121 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ABHD17BQ5VST6 288 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 LAMTOR1Q6IAA8 161 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 C3P1Q6ZMU1 363 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 FOXL2NBQ6ZUU3 175 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 RFPL4BQ6ZWI9 263 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 RAB11FIP2Q7L804 512 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 AAED1Q7RTV5 226 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC36A1Q7Z2H8 476 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 BEST3Q8N1M1 668 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ARRDC1Q8N5I2 433 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR52N4Q8NGI2 321 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR4D6Q8NGJ1 314 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR51T1Q8NGJ9 327 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5H2Q8NGV7 314 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR4K15Q8NH41 348 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 OR2V1Q8NHB1 315 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 COQ8AQ8NI60 647 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 THAP6Q8TBB0 222 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CT55Q8WUE5 264 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 EXTL1Q92935 676 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 CPNE4Q96A23 557 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SPSB1Q96BD6 273 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ADAT3Q96EY9 351 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF799Q96GE5 643 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 TECTBQ96PL2 329 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF416Q9BWM5 594 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 GPR87Q9BY21 358 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 SELENOIQ9C0D9 397 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ELL3Q9HB65 397 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 PARPBPQ9NWS1 579 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 AURKAIP1Q9NWT8 199 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 KCNN3Q9UGI6 736 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 KIF25Q9UIL4 384 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 MEMO1Q9Y316 297 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 MRPS18CQ9Y3D5 142 aaKnown RBP5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 EPG5Q9HCE0 2579 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 ABCA7Q8IZY2 2146 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 GON4LQ3T8J9 2241 aa5.15□□□□□ -1.59
ATPAF1-204ENST00000474020 KNL1Q8NG31 2342 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 UNC13CQ8NB66 2214 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 CCDC187A0A096LP49 1063 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 A0A1B0GTI1 187 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 LINC00862A6NCI5 91 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 OR6C6A6NF89 314 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 RFPL4AA6NLU0 287 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM14DPA8MWL7 114 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 RFPL4AL1F8VTS6 287 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 G3V3Y1 287 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 RAB27BO00194 218 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 ARPC5O15511 151 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 SGCEO43556 437 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 DOK2O60496 412 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 CA11O75493 328 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 CSTBP04080 98 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 PET100P0DJ07 73 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 VSIG10L2P0DP72 767 aa5.14□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC2A1P11166 492 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms