RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 CCDC58Q4VC31 144 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 PLCXD3Q63HM9 321 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 OR10Z1Q8NGY1 313 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
SDC3-203ENST00000471567 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 HHLA2Q9UM44 414 aa12.82□□□□□ -0.36
SDC3-203ENST00000471567 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ANKRD61A6NGH8 418 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ZNF732B4DXR9 585 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 F5H0A9 414 aaPredicted RBP12.81□□□□□ -0.36
SDC3-203ENST00000471567 CDIPTO14735 213 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 XPNPEP2O43895 674 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ZNF205O95201 554 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 CCDC159P0C7I6 412 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 PCMT1P22061 227 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 MYF6P23409 242 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 GPM6AP51674 278 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 FAM201AQ5SY85 155 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 C6orf141Q5SZD1 244 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 WDR82Q6UXN9 313 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 IZUMO2Q6UXV1 221 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 GLCCI1Q86VQ1 547 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 RDH10Q8IZV5 341 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 SCCPDHQ8NBX0 429 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 OR52N1Q8NH53 320 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 LRRC29Q8WV35 223 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 TECTBQ96PL2 329 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 OR51I2Q9H344 312 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 FKBP14Q9NWM8 211 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 MALRD1Q5VYJ5 2156 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
SDC3-203ENST00000471567 FN1P02751 2386 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 TRAV38-1A0A0B4J264 116 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 OOEPA6NGQ2 149 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 TMEM212A6NML5 194 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 CEACAM18A8MTB9 384 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 E9PI62 339 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 NDUFA2O43678 99 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 FOXH1O75593 365 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 GATBO75879 557 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 SERPINA3P01011 423 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 WNT2P09544 360 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 VHLP40337 213 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 RIPPLY3P57055 190 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 TEX36Q5VZQ5 186 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 RPL22L1Q6P5R6 122 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 DCDC5Q6ZRR9 648 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 STX19Q8N4C7 294 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 BOLLQ8N9W6 283 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 PP6455Q8WZ26 134 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 RPL3LQ92901 407 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 TMEM186Q96B77 213 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 CHST5Q9GZS9 411 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 COMMD4Q9H0A8 199 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 GPR173Q9NS66 373 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 SCN3BQ9NY72 215 aa12.8□□□□□ -0.36
SDC3-203ENST00000471567 RRP15Q9Y3B9 282 aaKnown RBP12.8□□□□□ -0.36
SDC3-203ENST00000471567 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 PQLC2LA1A4F0 135 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 A6NIN4 97 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 PLPP2O43688 288 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 CRLF1O75462 422 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 MUC1P15941 1255 aaPredicted RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 OR2G6Q5TZ20 316 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 ZNF573Q86YE8 665 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 DEFB108BQ8NET1 73 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 OR5AK2Q8NH90 309 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 ZNF671Q8TAW3 534 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 RPS4Y2Q8TD47 263 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 METTL17Q9H7H0 456 aaPredicted RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 LPAR3Q9UBY5 353 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 CLEC2DQ9UHP7 191 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 RAB26Q9ULW5 256 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 SLC7A11Q9UPY5 501 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 LRCH1Q9Y2L9 728 aa12.79□□□□□ -0.36
SDC3-203ENST00000471567 POLR3KQ9Y2Y1 108 aaPredicted RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
SDC3-203ENST00000471567 PPIAL4CA0A0B4J2A2 164 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 TRBV2A0A0J9YWF9 115 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 A8MXK9 166 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 H3BSH0 61 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms