RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DDX28Q9NUL7 540 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 KLHL28Q9NXS3 571 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 PLEK2Q9NYT0 353 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 STX18Q9P2W9 335 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 SLC9A8Q9Y2E8 581 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 MED13Q9UHV7 2174 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 WDFY3Q8IZQ1 3526 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 A0A1W2PQD3 144 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 H3BNH8 94 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 WWP2O00308 870 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 TP53I11O14683 189 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CLOCKO15516 846 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 FADS1O60427 444 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 TPST1O60507 370 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 EIF4E2O60573 245 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 DPM1O60762 260 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 UGT2B17O75795 530 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 OR2J2O76002 312 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 UTS2O95399 124 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ATP6V1G2O95670 118 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 IGKV1D-16P01601 117 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 OPN1SWP03999 348 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SEMG1P04279 462 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 IFNW1P05000 195 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 FABP3P05413 133 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 B4GALT1P15291 398 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 HPGDP15428 266 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 RPS4Y1P22090 263 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 FASP25445 335 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 IL12BP29460 328 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 GCKP35557 465 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 MAGEA2P43356 314 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SSR4P51571 173 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 MLF1P58340 268 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SMIM11AP58511 58 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 PLCXD2Q0VAA5 305 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CRMP1Q14194 572 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 GK3PQ14409 553 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 RCN1Q15293 331 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 NNATQ16517 81 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 MAPK14Q16539 360 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 NRF1Q16656 503 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF791Q3KP31 576 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 LIN52Q52LA3 116 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ACER2Q5QJU3 275 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CCNJQ5T5M9 372 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 VTCN1Q7Z7D3 282 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CYP4Z1Q86W10 505 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 VRK2Q86Y07 508 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CCDC71Q8IV32 467 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF525Q8N782 197 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 FAM86B1Q8N7N1 296 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 BHLHE23Q8NDY6 225 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 GPR32P1Q8NGA4 272 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 PYDC1Q8WXC3 89 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 PSMF1Q92530 271 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 EFHD2Q96C19 240 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CENPNQ96H22 339 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CXorf58Q96LI9 332 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 CCNL2Q96S94 520 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SECISBP2Q96T21 854 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 PAXXQ9BUH6 204 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 RSPO3Q9BXY4 272 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 POLR2J2Q9GZM3 115 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 POLR2J3Q9H1A7 115 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SDHAF3Q9NRP4 125 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 AGPAT4Q9NRZ5 378 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 VNN3Q9NY84 501 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 STMN3Q9NZ72 180 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 Q9UF83 564 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 PSORS1C1Q9UIG5 152 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ABCG2Q9UNQ0 655 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF443Q9Y2A4 671 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 SLC35A3Q9Y2D2 325 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 FAM32AQ9Y421 112 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ETV7Q9Y603 341 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 MRPS18BQ9Y676 258 aaKnown RBP3.88□□□□□ -1.79
CCDC39-202ENST00000471307 ENPP4Q9Y6X5 453 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 DCHS1Q96JQ0 3298 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 APC2O95996 2303 aa3.88□□□□□ -1.79
CCDC39-202ENST00000471307 HEATR5AQ86XA9 2040 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 GNGT2O14610 69 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 RRP8O43159 456 aaKnown RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF264O43296 627 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 LRRTM2O43300 516 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 UGT2B11O75310 529 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OXSR1O95747 527 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 CST1P01037 141 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 CSTAP01040 98 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 UQCRBP14927 111 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 IFNA8P32881 189 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OR1E2P47887 323 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 RFX3P48380 749 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 CYB561P49447 251 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ERFP50548 548 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 HLCSP50747 726 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ARHGDIAP52565 204 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 IST1P53990 364 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 FBXW4P57775 412 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 VLDLRP98155 873 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms