RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 BAZ1AQ9NRL2 1556 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SNAPC4Q5SXM2 1469 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 APCP25054 2843 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 RAPGEF6Q8TEU7 1601 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 TRBV9A0A0B4J1U6 114 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CCL15-CCL14A0A0B4J2E2 113 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 IGKV1-6A0A0C4DH72 117 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 A0A1W2PNM2 257 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ISPDA4D126 451 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CLOCKO15516 846 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ZZEF1O43149 2961 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SYNGR2O43760 224 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR2J3O76001 311 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 IGKV1-39P01597 117 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 IGHMP01871 453 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 IGKV1D-39P04432 117 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR5AC1P0C628 307 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 UQCRFS1P1P0C7P4 283 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PGA4P0DJD7 388 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PGA3P0DJD8 388 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 TROVE2P10155 538 aaKnown RBP eCLIP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 THRAP10827 490 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SLC2A3P11169 496 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF708P17019 499 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF24P17028 368 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CSRP1P21291 193 aaKnown RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 USF1P22415 310 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 RRM2P31350 389 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 GGT2P36268 569 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PRPHP41219 470 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PPICP45877 212 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 FOXA1P55317 472 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF121P58317 390 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 RAB10P61026 200 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ACTR1AP61163 376 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 C2orf54Q08AI8 447 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SELENBP1Q13228 472 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PPP1R7Q15435 360 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 TAF7Q15545 349 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CCL15Q16663 113 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 KRTAP20-1Q3LI63 56 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 LGALSLQ3ZCW2 172 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 C6orf99Q4VX62 202 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 GCSAMLQ5JQS6 135 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 TMEM31Q5JXX7 168 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CENPPQ6IPU0 288 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SLC8B1Q6J4K2 584 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 REEP3Q6NUK4 255 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CDH26Q8IXH8 852 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 NECAB1Q8N987 351 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR4M2Q8NGB6 313 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR9K2Q8NGE7 335 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR10W1Q8NGF6 305 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR4D6Q8NGJ1 314 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 OR8K3Q8NH51 312 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF420Q8TAQ5 688 aaPredicted RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 DCAKDQ8WVC6 231 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 C20orf166-AS1Q96NR2 134 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 MS4A8Q9BY19 250 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 PIGUQ9H490 435 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 FBXO8Q9NRD0 319 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 INIPQ9NRY2 104 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 TMEM106BQ9NUM4 274 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 RBFOX1Q9NWB1 397 aaKnown RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 RAB22AQ9UL26 194 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 LOC400499M0QZD8 3231 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 CR1P17927 2039 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 DMXL2Q8TDJ6 3036 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 DMXL1Q9Y485 3027 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 FREM2Q5SZK8 3169 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 SMG1Q96Q15 3661 aaKnown RBP0.36□□□□□ -2.35
UBXN4-207ENST00000471246 KIF13AQ9H1H9 1805 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 HIVEP1P15822 2718 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 XIRP2A4UGR9 3374 aa0.36□□□□□ -2.35
UBXN4-207ENST00000471246 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 COL24A1Q17RW2 1714 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 ARAP1Q96P48 1450 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 SRRM2Q9UQ35 2752 aaKnown RBP0.35□□□□□ -2.35
UBXN4-207ENST00000471246 BRCA1P38398 1863 aaKnown RBP0.35□□□□□ -2.35
UBXN4-207ENST00000471246 LOC102724200A0A096LPH7 203 aaPredicted RBP0.35□□□□□ -2.35
UBXN4-207ENST00000471246 A0A0A6YYD5 115 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 H3BQ85 93 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 AP3B1O00203 1094 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 NDUFAB1O14561 156 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 SLC16A7O60669 478 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 ENTPD6O75354 484 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 FARS2O95363 451 aaKnown RBP0.35□□□□□ -2.35
UBXN4-207ENST00000471246 CDS2O95674 445 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 TRBV12-3P01733 135 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 SLC35G6P0C7Q6 338 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 P0DMU3 169 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 FAM231AP0DMU4 169 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 FAM231CP0DMU5 169 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 MYL9P24844 172 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 PBLDP30039 288 aaPredicted RBP0.35□□□□□ -2.35
UBXN4-207ENST00000471246 APLNRP35414 380 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 PCK1P35558 622 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 OR1G1P47890 313 aa0.35□□□□□ -2.35
UBXN4-207ENST00000471246 FABP6P51161 128 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms