RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ALOX5APP20292 161 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 EEF1B2P24534 225 aaKnown RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 GABRA2P47869 451 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 GPM6AP51674 278 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 PROK1P58294 105 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 RPS7P62081 194 aaKnown RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 GK3PQ14409 553 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 METAP1DQ6UB28 335 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 GDPGP1Q6ZNW5 385 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 KRT77Q7Z794 578 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 BBS1Q8NFJ9 593 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 ANGPTL6Q8NI99 470 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 C8orf46Q8TAG6 207 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 TNFRSF14Q92956 283 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 RBM4BQ9BQ04 359 aaKnown RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 THTPAQ9BU02 230 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 DNTTIP1Q9H147 329 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 NLKQ9UBE8 527 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 SLC25A10Q9UBX3 287 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 LAMP5Q9UJQ1 280 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 LRP12Q9Y561 859 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF816-ZNF321PA0A0X1KG74 233 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 MEIOCA2RUB1 952 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ARRDC5A6NEK1 342 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 OR2AT4A6NND4 320 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF732B4DXR9 585 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 M0QZ24 198 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 TIMM23O14925 209 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 PRODHO43272 600 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 CLPXO76031 633 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 FBP1P09467 338 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 GLRA1P23415 457 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 DCTDP32321 178 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 APOFQ13790 326 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 OCLNQ16625 522 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 CEP78Q5JTW2 689 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 SLC35D3Q5M8T2 416 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 MOB3CQ70IA8 216 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ZDHHC23Q8IYP9 409 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ZNRF1Q8ND25 227 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 LRTOMTQ8WZ04 291 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 PPP1R14AQ96A00 147 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 DUS3LQ96G46 650 aaKnown RBP10.88□□□□□ -0.67
CPSF4-210ENST00000469897 OR51I2Q9H344 312 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF556Q9HAH1 456 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 TCF7L1Q9HCS4 588 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ABCB9Q9NP78 766 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
CPSF4-210ENST00000469897 TMEM269A0A1B0GVZ9 245 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 A0A1W2PQ09 198 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 BTBD17A6NE02 478 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 NKX6-3A6NJ46 265 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 SIGLEC5O15389 551 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 E2F6O75461 281 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 PSG2P11465 335 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 MAP2K3P46734 347 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 UBE2E1P51965 193 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 PSMA6P60900 246 aaKnown RBP10.87□□□□□ -0.67
CPSF4-210ENST00000469897 CEACAM21Q3KPI0 293 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF671Q8TAW3 534 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 TEAD3Q99594 435 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 C16orf95Q9H693 158 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 ELL3Q9HB65 397 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-210ENST00000469897 TVP23BQ9NYZ1 205 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 MAB21L2Q9Y586 359 aa10.87□□□□□ -0.67
CPSF4-210ENST00000469897 IGKV1D-17A0A075B6S4 117 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 H0YAE9 185 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 M0R1W7 72 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 GSC2O15499 205 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 FAM107AO95990 144 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 PAHP00439 452 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
CPSF4-210ENST00000469897 ANXA8P13928 327 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 SLC2A5P22732 501 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 SAA4P35542 130 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 CAV3P56539 151 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 GNG3P63215 75 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 BLMHQ13867 455 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 SNAPC1Q16533 368 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 DHRS7BQ6IAN0 325 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-210ENST00000469897 KCTD18Q6PI47 426 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-210ENST00000469897 THAP5Q7Z6K1 395 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
CPSF4-210ENST00000469897 OR5A2Q8NGI9 324 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 OR51E1Q8TCB6 317 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 C17orf50Q8WW18 174 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 AQP3Q92482 292 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 YIPF3Q9GZM5 350 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 PBOV1Q9GZY1 135 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms