RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 TRBV5-5A0A0J9YX44 114 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 LOC100289279A0A1B0GTE1 492 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 VWC2LB2RUY7 222 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 GPX5O75715 221 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 HEXAP06865 529 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 OCMP0CE72 109 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 FOSL1P15407 271 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 GALP22466 123 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 NR4A2P43354 598 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 GPR6P46095 362 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 PRSS12P56730 875 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 KCNJ8Q15842 424 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 XAF1Q6GPH4 301 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 TGIF2LYQ8IUE0 185 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 KRTAP1-3Q8IUG1 177 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 TSPAN14Q8NG11 270 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 TSEN15Q8WW01 171 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 RNF7Q9UBF6 113 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 POLDIP2Q9Y2S7 368 aa10.67□□□□□ -0.7
SPTLC1-204ENST00000469778 TEX15Q9BXT5 2789 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 PQLC2LA1A4F0 135 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 TRIM64BA6NI03 449 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF879B4DU55 563 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF732B4DXR9 585 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 TMEM178BH3BS89 294 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 MAGEB3O15480 346 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 PPIHO43447 177 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 NDUFA2O43678 99 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 CDC14BO60729 498 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ALDOBP05062 364 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 GRPP07492 148 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 HSMCR30P0CW71 290 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ATF1P18846 271 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RAB3AP20336 220 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RANBP1P43487 201 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RBP2P50120 134 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ATP1B3P54709 279 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RPS11P62280 158 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 PPP3R1P63098 170 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF154Q13106 437 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 UBE2V2Q15819 145 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF529Q6P280 563 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 KCTD8Q6ZWB6 473 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 MOGAT3Q86VF5 341 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 CDH26Q8IXH8 852 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 MUC20Q8N307 709 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 OR51A4Q8NGJ6 313 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 HPSE2Q8WWQ2 592 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 YIPF5Q969M3 257 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 TMEM106AQ96A25 262 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 Q96MF0 132 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 PKIBQ9C010 78 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RHOFQ9HBH0 211 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 RASL12Q9NYN1 266 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 NPTNQ9Y639 398 aa10.66□□□□□ -0.7
SPTLC1-204ENST00000469778 PRRC2AP48634 2157 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 MEGF11A6BM72 1044 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 A6NLC8 198 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 NOS1APO75052 506 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 LY6HO94772 140 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 LHBP01229 141 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 PCMT1P22061 227 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 USF1P22415 310 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 MPZP25189 248 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 MAP2K4P45985 399 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 GPM6AP51674 278 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 CARTPTQ16568 116 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 ARMCX4Q5H9R4 360 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 CEP78Q5JTW2 689 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 UNQ9370/PRO34162Q6UXP9 181 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 LHFPL2Q6ZUX7 228 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 LRRC28Q86X40 367 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 PHC2Q8IXK0 858 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 OR10AC1Q8NH08 325 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 RGP1Q92546 391 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 C12orf43Q96C57 262 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 BORCS8Q96FH0 119 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 OPALINQ96PE5 141 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 REG4Q9BYZ8 158 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 TMEM138Q9NPI0 162 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 C1orf123Q9NWV4 160 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 FOXJ3Q9UPW0 622 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 MYO9AB2RTY4 2548 aa10.65□□□□□ -0.7
SPTLC1-204ENST00000469778 CSMD2Q7Z408 3487 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 PPIAL4EA0A075B759 164 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 TRBV5-7A0A0A0MS05 114 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 CYSRT1A8MQ03 144 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 PPIAL4DF5H284 164 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 J3QT63 122 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 CCRL2O00421 344 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 SULT1B1O43704 296 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 CYB5AP00167 134 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 PPIAL4FP0DN26 164 aa10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 MUC1P15941 1255 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-204ENST00000469778 FSTP19883 344 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms