RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GPM6AP51674 278 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 EFNB2P52799 333 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 IL5RAQ01344 420 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 HERPUD1Q15011 391 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 FAM189A2Q15884 450 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 MICAQ29983 383 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 FBLN7Q53RD9 439 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 FAM76BQ5HYJ3 339 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 CEP78Q5JTW2 689 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 Q6ZTK2 550 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-204ENST00000469207 MKXQ8IYA7 352 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 OR8B12Q8NGG6 310 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 OR10Z1Q8NGY1 313 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 OR5R1Q8NH85 324 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 PIFOQ8TCI5 191 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 PPP1R14AQ96A00 147 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 MED30Q96HR3 178 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 DMRTB1Q96MA1 342 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 METTL8Q9H825 291 aaKnown RBP9.98□□□□□ -0.81
HDAC3-204ENST00000469207 CMC2Q9NRP2 79 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 C19orf12Q9NSK7 152 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 MPC1Q9Y5U8 109 aa9.98□□□□□ -0.81
HDAC3-204ENST00000469207 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 NKX6-3A6NJ46 265 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 RIIAD1A6NNX1 92 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 ZNF732B4DXR9 585 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 M0R1W7 72 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 PSMD9O00233 223 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 CHST1O43916 411 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 CST4P01036 141 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 IFNGP01579 166 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 ZNF3P17036 446 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 MAGEA2P43356 314 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 KIR2DS4P43632 304 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 RAB13P51153 203 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 MS4A2Q01362 244 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 ACSM1Q08AH1 577 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 HABP2Q14520 560 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-204ENST00000469207 OXLD1Q5BKU9 147 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 Q6ZPA2 131 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 SHFQ7M4L6 423 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 FAM185AQ8N0U4 392 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 BATF2Q8N1L9 274 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 C11orf42Q8N5U0 333 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 KLHDC1Q8N7A1 406 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 TMEM185AQ8NFB2 350 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 OR4M1Q8NGD0 313 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 OR51G2Q8NGK0 314 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 ZNF488Q96MN9 340 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 DGCR6LQ9BY27 220 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 DNTTIP1Q9H147 329 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 ZNF222Q9UK12 451 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 BAIAP2Q9UQB8 552 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
HDAC3-204ENST00000469207 SAMHD1Q9Y3Z3 626 aaKnown RBP9.97□□□□□ -0.81
HDAC3-204ENST00000469207 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
HDAC3-204ENST00000469207 MEX3AA1L020 520 aaKnown RBP9.96□□□□□ -0.82
HDAC3-204ENST00000469207 TMEM210A6NLX4 147 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 H3BN98 237 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 APOC1P02654 83 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OPN1MWP04001 364 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 LYNP07948 512 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OPN1MW2P0DN77 364 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OPN1MW3P0DN78 364 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 CFL1P23528 166 aaKnown RBP9.96□□□□□ -0.82
HDAC3-204ENST00000469207 CEBPDP49716 269 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-204ENST00000469207 BMXP51813 675 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 BLVRAP53004 296 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 CAV3P56539 151 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 NSUN5P1Q3KNT7 163 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 PLA1AQ53H76 456 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 HSP90B2PQ58FF3 399 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 NCR3LG1Q68D85 454 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OR2T5Q6IEZ7 315 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 MOB3CQ70IA8 216 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 LHFPL4Q7Z7J7 247 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 TMEM179BQ7Z7N9 219 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 ZDHHC23Q8IYP9 409 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 DYNAPQ8N1N2 210 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 CD177Q8N6Q3 437 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 BBS1Q8NFJ9 593 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OR10G2Q8NGC3 310 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OR2T29Q8NH02 315 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OTOSQ8NHW6 89 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 CFHR4Q92496 578 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 FEVQ99581 238 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 NKX3-1Q99801 234 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-204ENST00000469207 MEGF9Q9H1U4 602 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 OR51I2Q9H344 312 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 TAGLN3Q9UI15 199 aa9.96□□□□□ -0.82
HDAC3-204ENST00000469207 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
HDAC3-204ENST00000469207 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
HDAC3-204ENST00000469207 CD28P10747 220 aa9.95□□□□□ -0.82
HDAC3-204ENST00000469207 CCL3L1P16619 93 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms