RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
COL27A1-203ENST00000468565 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
COL27A1-203ENST00000468565 CYSLTR2Q9NS75 346 aa12.32□□□□□ -0.44
COL27A1-203ENST00000468565 GNG8Q9UK08 70 aa12.32□□□□□ -0.44
COL27A1-203ENST00000468565 J3QW42 95 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 ARL6IP5O75915 188 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 COL8A2P25067 703 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 INPP1P49441 399 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 MMP15P51511 669 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 HCCSP53701 268 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 LRRC28Q86X40 367 aaPredicted RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 SLC26A10Q8NG04 563 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 OR1F12Q8NHA8 337 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 ENKURQ8TC29 256 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 YIPF5Q969M3 257 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 C11orf54Q9H0W9 315 aaPredicted RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 TRAV1-2A0A0B4J238 106 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 SELENOFO60613 162 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 GATBO75879 557 aaKnown RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 CENPAP49450 140 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 TMEM33P57088 247 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 TMEM255AQ5JRV8 349 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 FAM209AQ5JX71 171 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 OTPQ5XKR4 325 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 TTTY10Q9BZA0 68 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 HDHD2Q9H0R4 259 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 PPIL3Q9H2H8 161 aaKnown RBP12.31□□□□□ -0.44
COL27A1-203ENST00000468565 EXTL2Q9UBQ6 330 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 LHFPL6Q9Y693 200 aa12.31□□□□□ -0.44
COL27A1-203ENST00000468565 TRBV2A0A0J9YWF9 115 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 PLSCR5A0PG75 271 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 RER1O15258 196 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 RP2O75695 350 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 CCNKO75909 580 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 GPANK1O95872 356 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 ADH4P08319 380 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 ELK1P19419 428 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 RAB3BP20337 219 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
COL27A1-203ENST00000468565 MAP2K3P46734 347 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 ZNF81P51508 661 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 CCL8P80075 99 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 P2RY14Q15391 338 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 MEP1BQ16820 701 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 FAM27D1Q5T7N8 215 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 PHYHIPQ92561 330 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 C1orf159Q96HA4 380 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
COL27A1-203ENST00000468565 CDC42EP3Q9UKI2 254 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 KCNS2Q9ULS6 477 aa12.3□□□□□ -0.44
COL27A1-203ENST00000468565 LRP5LA4QPB2 252 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 PLA2G10O15496 165 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 LMX1BO60663 402 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 KRT8P05787 483 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 THBS2P35442 1172 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 RSBN1Q5VWQ0 802 aaPredicted RBP12.29□□□□□ -0.44
COL27A1-203ENST00000468565 SLC16A9Q7RTY1 509 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 GTF3AQ92664 365 aaKnown RBP12.29□□□□□ -0.44
COL27A1-203ENST00000468565 DIRC2Q96SL1 478 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 DECR2Q9NUI1 292 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 LPAR3Q9UBY5 353 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 COPS3Q9UNS2 423 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 DYSFO75923 2080 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 IGHV1-46P01743 117 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 TRAPPC2P0DI81 140 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 TRAPPC2BP0DI82 140 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 OR10A3P58181 314 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 PSG7Q13046 419 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 LINC01590Q5TEZ4 76 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 FAM220AQ7Z4H9 259 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 KCTD20Q7Z5Y7 419 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 SAMD12Q8N8I0 201 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 ZNRF4Q8WWF5 429 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 MMP28Q9H239 520 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 SAP30LQ9HAJ7 183 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 ZDHHC8Q9ULC8 765 aa12.29□□□□□ -0.44
COL27A1-203ENST00000468565 A0A0G2JK05 382 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 IGHV1-69-2A0A0G2JMI3 117 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 NOTOA8MTQ0 251 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 ZNF879B4DU55 563 aa12.28□□□□□ -0.44
COL27A1-203ENST00000468565 MAGEB4O15481 346 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms