RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PSMB9P28065 219 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 ALDH3B1P43353 468 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 CARTPTQ16568 116 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 Q499Y3 187 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 ARMCX4Q5H9R4 360 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 IL17RELQ6ZVW7 336 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 KCTD8Q6ZWB6 473 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 SERPINA12Q8IW75 414 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 OR2Z1Q8NG97 314 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 OR14K1Q8NGZ2 314 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 PHYHIPQ92561 330 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 PPP1R14AQ96A00 147 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 RNF166Q96A37 237 aaPredicted RBP14.8□□□□□ -0.04
CPSF4-209ENST00000465132 ELMOD3Q96FG2 381 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 PDCD1LG2Q9BQ51 273 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 C19orf24Q9BVV8 132 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 RTL8AQ9BWD3 113 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 ZNF275Q9NSD4 429 aaPredicted RBP14.8□□□□□ -0.04
CPSF4-209ENST00000465132 IL19Q9UHD0 177 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 SLC7A11Q9UPY5 501 aa14.8□□□□□ -0.04
CPSF4-209ENST00000465132 SVEP1Q4LDE5 3571 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 A0A1B0GWJ7 208 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 CCRL2O00421 344 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 NRASP01111 189 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 HLA-DPB1P04440 258 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 CD55P08174 381 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 PCMT1P22061 227 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 CNN3Q15417 329 aaKnown RBP14.79□□□□□ -0.04
CPSF4-209ENST00000465132 MSMPQ1L6U9 139 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 ZDHHC23Q8IYP9 409 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 PIGCQ92535 297 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 ERGIC1Q969X5 290 aa14.79□□□□□ -0.04
CPSF4-209ENST00000465132 ADAT1Q9BUB4 502 aaKnown RBP14.79□□□□□ -0.04
CPSF4-209ENST00000465132 MRPS26Q9BYN8 205 aaKnown RBP14.79□□□□□ -0.04
CPSF4-209ENST00000465132 MYEF2Q9P2K5 600 aaKnown RBP14.79□□□□□ -0.04
CPSF4-209ENST00000465132 MALRD1Q5VYJ5 2156 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 ANKRD61A6NGH8 418 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 OR5B21A6NL26 309 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 MAGEB3O15480 346 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 SPRY3O43610 288 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 LALBAP00709 142 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 NAT2P11245 290 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 HNF1AP20823 631 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 GALP22466 123 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 PRKACBP22694 351 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 CA6P23280 308 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 GABRA5P31644 462 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 RANBP1P43487 201 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 MRPS11P82912 194 aaKnown RBP14.78□□□□□ -0.04
CPSF4-209ENST00000465132 TNFAIP6P98066 277 aaPredicted RBP14.78□□□□□ -0.04
CPSF4-209ENST00000465132 SRSF2Q01130 221 aaKnown RBP14.78□□□□□ -0.04
CPSF4-209ENST00000465132 PRDX4Q13162 271 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 NEDD8Q15843 81 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 SYT6Q5T7P8 510 aaPredicted RBP14.78□□□□□ -0.04
CPSF4-209ENST00000465132 LIPKQ5VXJ0 399 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 XAF1Q6GPH4 301 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 UTS2BQ765I0 119 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 RDH10Q8IZV5 341 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 SAP30LQ9HAJ7 183 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 MSL2Q9HCI7 577 aa14.78□□□□□ -0.04
CPSF4-209ENST00000465132 PNMA8CA0A1B0GUJ8 204 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 C5orf63A6NC05 138 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 TMEM210A6NLX4 147 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 ZNF879B4DU55 563 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 ARL6IP5O75915 188 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 TGFAP01135 160 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 IGHV1-46P01743 117 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 FAHP16930 419 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 ACKR3P25106 362 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 PPP3R1P63098 170 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 CEACAM21Q3KPI0 293 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 ALKBH6Q3KRA9 238 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 TIMM50Q3ZCQ8 353 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 PLCXD3Q63HM9 321 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 PARP16Q8N5Y8 322 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 ZFP41Q8N8Y5 198 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 OR5A2Q8NGI9 324 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 HPS1Q92902 700 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 FGGYQ96C11 551 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 PGLYRP3Q96LB9 341 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 OPALINQ96PE5 141 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 BPESC1Q9GZL8 116 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 CHST5Q9GZS9 411 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 SLITRK2Q9H156 845 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 RHBDD3Q9Y3P4 386 aa14.77□□□□□ -0.05
CPSF4-209ENST00000465132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.77□□□□□ -0.057e-9■■■■□ 23.6
CPSF4-209ENST00000465132 ZSCAN5BA6NJL1 495 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 LRRC30A6NM36 301 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 ZNF850A8MQ14 1090 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 ALX3O95076 343 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 JUNBP17275 347 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-209ENST00000465132 CD200P41217 278 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 TSTQ16762 297 aaKnown RBP14.76□□□□□ -0.05
CPSF4-209ENST00000465132 TMEM42Q69YG0 159 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 MOB3CQ70IA8 216 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 TMEM106AQ96A25 262 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 SPSB1Q96BD6 273 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 SOX7Q9BT81 388 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 TMED9Q9BVK6 235 aa14.76□□□□□ -0.05
CPSF4-209ENST00000465132 ZCCHC4Q9H5U6 513 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms