RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HSP90B2PQ58FF3 399 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 TEX30Q5JUR7 227 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF511Q8NB15 262 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 SLC37A3Q8NCC5 494 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 TMEM185AQ8NFB2 350 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-220ENST00000464800 OR10A2Q9H208 303 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 RGCCQ9H4X1 137 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 IL1RAPQ9NPH3 570 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 DNAJC27Q9NZQ0 273 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 MEGF11A6BM72 1044 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF850A8MQ14 1090 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 ADARB2-AS1A8MUL3 147 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 PEX14O75381 377 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 GYPBP06028 91 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 HSD17B1P14061 328 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 CD33P20138 364 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 GLRA1P23415 457 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 LGALS4P56470 323 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 PRSS45Q7RTY3 260 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 MKXQ8IYA7 352 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 Q8N2B8 174 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 PAPD5Q8NDF8 572 aaKnown RBP11.84□□□□□ -0.51
MCF2L-220ENST00000464800 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
MCF2L-220ENST00000464800 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 A0A1W2PPH5 198 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 ARPC2O15144 300 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 GLCEO94923 617 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 SPI1P17947 270 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 CAPZA1P52907 286 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 HMGA2P52926 109 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 CRMP1Q14194 572 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 SAMD4BQ5PRF9 694 aaKnown RBP11.83□□□□□ -0.52
MCF2L-220ENST00000464800 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 OR9Q2Q8NGE9 314 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 PIFOQ8TCI5 191 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 PGAM5Q96HS1 289 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 RNF170Q96K19 258 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 CDRT15Q96T59 188 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 BRD7Q9NPI1 651 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 C19orf12Q9NSK7 152 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 TBC1D23Q9NUY8 699 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 IL20Q9NYY1 176 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF319Q9P2F9 582 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF222Q9UK12 451 aa11.83□□□□□ -0.52
MCF2L-220ENST00000464800 VGLL3A8MV65 326 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 KRT36O76013 467 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 CST4P01036 141 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 GASTP01350 101 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 IGLL1P15814 213 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 FAHP16930 419 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 COX7A1P24310 79 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 ACKR3P25106 362 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 DCTDP32321 178 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 BLVRAP53004 296 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 SLC25A1P53007 311 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 CNN3Q15417 329 aaKnown RBP11.82□□□□□ -0.52
MCF2L-220ENST00000464800 ARSJQ5FYB0 599 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-220ENST00000464800 FAM76BQ5HYJ3 339 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 TIGD4Q8IY51 512 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 OR8D4Q8NGM9 314 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 OR6N2Q8NGY6 317 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 OR5K1Q8NHB7 308 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 WIPF2Q8TF74 440 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-220ENST00000464800 RNF133Q8WVZ7 376 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 BTBD10Q9BSF8 475 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 CDCA4Q9BXL8 241 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 FGF23Q9GZV9 251 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-220ENST00000464800 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 LRP12Q9Y561 859 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 LYVE1Q9Y5Y7 322 aa11.82□□□□□ -0.52
MCF2L-220ENST00000464800 COL7A1Q02388 2944 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 A0A1W2PPE2 198 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 A0A1W2PR64 198 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 K7EIL1 84 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 TNFRSF11BO00300 401 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 RHBDL1O75783 438 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 CLUP10909 449 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 PSG2P11465 335 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 GPM6AP51674 278 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 RPL31P62899 125 aaKnown RBP11.81□□□□□ -0.52
MCF2L-220ENST00000464800 PLA1AQ53H76 456 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF770Q6IQ21 691 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-220ENST00000464800 RASSF6Q6ZTQ3 369 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 ERI1Q8IV48 349 aaKnown RBP11.81□□□□□ -0.52
MCF2L-220ENST00000464800 PGAM4Q8N0Y7 254 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 LINC00471Q8N535 108 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 PIGCQ92535 297 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 SDSLQ96GA7 329 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms