RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 BABAM2Q9NXR7 383 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 RAB26Q9ULW5 256 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 PCDHB10Q9UN67 800 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 PPIAL4AQ9Y536 164 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 HIVEP2P31629 2446 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 NIPBLQ6KC79 2804 aaeCLIP12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 NSD1Q96L73 2696 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 TRBV2A0A0J9YWF9 115 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 B4DSR2 109 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF732B4DXR9 585 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 PTGES3LE9PB15 166 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 SLC1A7O00341 560 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 CDIPTO14735 213 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 LMX1BO60663 402 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 TGFAP01135 160 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 IGHV2-5P01817 119 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 RPSAP08865 295 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 CCDC159P0C7I6 412 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 C21orf33P30042 268 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 GTF2A1P52655 376 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 CCDC58Q4VC31 144 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 RPL22L1Q6P5R6 122 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 WDR82Q6UXN9 313 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 BOLLQ8N9W6 283 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 SCCPDHQ8NBX0 429 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 OR52N1Q8NH53 320 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 RPL3LQ92901 407 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 C10orf35Q96D05 121 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 GPR173Q9NS66 373 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 HHLA2Q9UM44 414 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.464e-19■■□□□ 13.1
SQSTM1-205ENST00000464493 MALRD1Q5VYJ5 2156 aa12.18□□□□□ -0.46
SQSTM1-205ENST00000464493 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 ANKRD61A6NGH8 418 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 A8MV72 311 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 FAM157AC9JC47 383 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 ZFPL1O95159 310 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 SERPINA3P01011 423 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 LHBP01229 141 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF16P17020 682 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 CFHR2P36980 270 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 HOXA4Q00056 320 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF404Q494X3 552 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 FAM166AQ6J272 317 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 GCSAMQ8N6F7 178 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 C19orf18Q8NEA5 215 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 DEFB108BQ8NET1 73 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 LRRC29Q8WV35 223 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 MYDGFQ969H8 173 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 FGGYQ96C11 551 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 PDCD1LG2Q9BQ51 273 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 METTL17Q9H7H0 456 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 TPRKBQ9Y3C4 175 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 SVEP1Q4LDE5 3571 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
SQSTM1-205ENST00000464493 CEACAM18A8MTB9 384 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 OGG1O15527 345 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 GATBO75879 557 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 CDK1P06493 297 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 CDK5R1Q15078 307 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 UBE2V2Q15819 145 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 KCNJ8Q15842 424 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 SFRP4Q6FHJ7 346 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 XAF1Q6GPH4 301 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 OR51A4Q8NGJ6 313 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 OR10AC1Q8NH08 325 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 PP6455Q8WZ26 134 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 ADAT3Q96EY9 351 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF184Q99676 751 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM246Q9BRR3 403 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 CHST5Q9GZS9 411 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 LPAR2Q9HBW0 351 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 TRIM36Q9NQ86 728 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 ERVK-18Q9QC07 812 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 SLC7A11Q9UPY5 501 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 ERGIC3Q9Y282 383 aa12.16□□□□□ -0.46
SQSTM1-205ENST00000464493 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 OOEPA6NGQ2 149 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 LGALS8O00214 317 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 MYL12BO14950 172 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 MSMBP08118 114 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 WNT2P09544 360 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF20P17024 532 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 EGR1P18146 543 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 CPT2P23786 658 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 CD80P33681 288 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms