RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TIGD6	Q17RP2	521 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	LRRC10	Q5BKY1	277 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	NCR3LG1	Q68D85	454 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	FAM57B	Q71RH2	274 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	TIGD4	Q8IY51	512 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	KLHDC1	Q8N7A1	406 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR52L1	Q8NGH7	329 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	ASB9	Q96DX5	294 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	ABHD6	Q9BV23	337 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	RANBP3	Q9H6Z4	567 aa	Predicted RBP	9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	VNN3	Q9NY84	501 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	ACTR3B	Q9P1U1	418 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	SLC25A10	Q9UBX3	287 aa	Predicted RBP	9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	N6AMT1	Q9Y5N5	214 aa		9.07	□□□□□ -0.96
PTPN7-204	ENST00000462815	TMEM210	A6NLX4	147 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	AKR7A2	O43488	359 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	RHBDL1	O75783	438 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	ANXA2	P07355	339 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	ATP6V1B2	P21281	511 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	IL5RA	Q01344	420 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	PRDX4	Q13162	271 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	EIF2B1	Q14232	305 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	AANAT	Q16613	207 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	LCN8	Q6JVE9	175 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	C11orf88	Q6PI97	169 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	C11orf44	Q8N8P7	122 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	CSNK2A3	Q8NEV1	391 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR52H1	Q8NGJ2	320 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	H1FX	Q92522	213 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	CCDC124	Q96CT7	223 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	DUS3L	Q96G46	650 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	SSX3	Q99909	188 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	PAPOLG	Q9BWT3	736 aa	Known RBP	9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	TSSK6	Q9BXA6	273 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	MUC13	Q9H3R2	512 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	SERTAD4	Q9NUC0	356 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	ARMC1	Q9NVT9	282 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	DNAJC27	Q9NZQ0	273 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	ZNF391	Q9UJN7	358 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	MPC1	Q9Y5U8	109 aa		9.06	□□□□□ -0.96
PTPN7-204	ENST00000462815	NOTCH3	Q9UM47	2321 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	TENM3	Q9P273	2699 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	TCRBV5S2	A0A599	114 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	ANKRD61	A6NGH8	418 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR2AT4	A6NND4	320 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	ZNF850	A8MQ14	1090 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	PIN1P1	O15428	100 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	KRT36	O76013	467 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	PAH	P00439	452 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	PSG2	P11465	335 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	CFL1	P23528	166 aa	Known RBP	9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	SLC15A1	P46059	708 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	GMFB	P60983	142 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	TAF13	Q15543	124 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	FAM189A2	Q15884	450 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	LY6E	Q16553	131 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	LRRC75B	Q2VPJ9	315 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815		Q6ZTK2	550 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	REC114	Q7Z4M0	266 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	DHFR2	Q86XF0	187 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815		Q8N2B8	174 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	ZNRF1	Q8ND25	227 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR6K6	Q8NGW6	343 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	SDSL	Q96GA7	329 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	MED30	Q96HR3	178 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	NSMCE2	Q96MF7	247 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	MICU1	Q9BPX6	476 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	RTL8A	Q9BWD3	113 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	DGCR6L	Q9BY27	220 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR10A2	Q9H208	303 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	RGCC	Q9H4X1	137 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	MED20	Q9H944	212 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	ZNF702P	Q9H963	129 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	CMC2	Q9NRP2	79 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	C19orf12	Q9NSK7	152 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	TBC1D23	Q9NUY8	699 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	NLK	Q9UBE8	527 aa		9.05	□□□□□ -0.96
PTPN7-204	ENST00000462815	TRBV23-1	A0A0A0MS06	115 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	NKX6-3	A6NJ46	265 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	FAM90A8P	A6NJQ4	464 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	FAM183A	A6NL82	134 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	TNFRSF11B	O00300	401 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	SOX14	O95416	240 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	HSD11B1	P28845	292 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	GNAL	P38405	381 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	BLVRA	P53004	296 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	ACTR3	P61158	418 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	PPP1R8	Q12972	351 aa	Known RBP	9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	GFOD2	Q3B7J2	385 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	OXLD1	Q5BKU9	147 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	LDLRAD2	Q5SZI1	272 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	CCBE1	Q6UXH8	406 aa	Predicted RBP	9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	CYP2R1	Q6VVX0	501 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	ERI1	Q8IV48	349 aa	Known RBP	9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	MKX	Q8IYA7	352 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	DYNAP	Q8N1N2	210 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	LINC00471	Q8N535	108 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	AQP11	Q8NBQ7	271 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR2T33	Q8NG76	320 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR4C13	Q8NGP0	309 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms