RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 LRGUKQ96M69 825 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 WDR13Q9H1Z4 485 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
SKA3-204ENST00000462482 A0A1W2PPH5 198 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 OR2AT4A6NND4 320 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 GNGT2O14610 69 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 SIGLEC5O15389 551 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 TSPAN15O95858 294 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 HMGN1P05114 100 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ACAA1P09110 424 aaPredicted RBP12.61□□□□□ -0.39
SKA3-204ENST00000462482 SELLP14151 372 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 MAP2K3P46734 347 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 CAPZA1P52907 286 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 CAV3P56539 151 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 RPS7P62081 194 aaKnown RBP12.61□□□□□ -0.39
SKA3-204ENST00000462482 LCN8Q6JVE9 175 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 C11orf88Q6PI97 169 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 THAP5Q7Z6K1 395 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 KRT77Q7Z794 578 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 COMMD2Q86X83 199 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 IQCF1Q8N6M8 205 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 Q8N7P7 452 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ANGPTL6Q8NI99 470 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ZNF671Q8TAW3 534 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 DUS3LQ96G46 650 aaKnown RBP12.61□□□□□ -0.39
SKA3-204ENST00000462482 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 AMELYQ99218 206 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 PPP1R3EQ9H7J1 279 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ZNF556Q9HAH1 456 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 RAB18Q9NP72 206 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 ZNF319Q9P2F9 582 aa12.61□□□□□ -0.39
SKA3-204ENST00000462482 TRBV23-1A0A0A0MS06 115 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 TCRBV5S2A0A599 114 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 B2RBV5 119 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 AMY2BP19961 511 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 GPM6AP51674 278 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 PSMA6P60900 246 aaKnown RBP12.6□□□□□ -0.39
SKA3-204ENST00000462482 GNG3P63215 75 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 TRIM25Q14258 630 aaKnown RBP12.6□□□□□ -0.39
SKA3-204ENST00000462482 DGUOKQ16854 277 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 FAM76BQ5HYJ3 339 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 SLC35E4Q6ICL7 350 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 PLBD1Q6P4A8 553 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 FAM185AQ8N0U4 392 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 BEND2Q8NDZ0 799 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 ITFG2Q969R8 447 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 FEVQ99581 238 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 VNN3Q9NY84 501 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 FBLN5Q9UBX5 448 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
SKA3-204ENST00000462482 hCG_1809904A0A1W2PP81 198 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 A0A1W2PPE2 198 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 A0A1W2PR64 198 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 A0A1W2PRV1 198 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 ZNF732B4DXR9 585 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 H3BUX3 64 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 GSC2O15499 205 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 PRODHO43272 600 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 ANGPTL7O43827 346 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 SELENOFO60613 162 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 CST1P01037 141 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 RAP2AP10114 183 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 ACKR3P25106 362 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 GNGT1P63211 74 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 GINS1Q14691 196 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 KCTD18Q6PI47 426 aaPredicted RBP12.59□□□□□ -0.39
SKA3-204ENST00000462482 PNKDQ8N490 385 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 OR8B12Q8NGG6 310 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 TNFRSF14Q92956 283 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 HEXA-AS1Q9H8Q6 139 aa12.59□□□□□ -0.39
SKA3-204ENST00000462482 ARRDC5A6NEK1 342 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 ACOD1A6NK06 481 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 E2F6O75461 281 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 ATP6V1B1P15313 513 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 DLX1P56177 255 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 LGALS4P56470 323 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 CEACAM21Q3KPI0 293 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 SLC35D3Q5M8T2 416 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 C1QL4Q86Z23 238 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 HPSE2Q8WWQ2 592 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 CLPTM1LQ96KA5 538 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 SSX3Q99909 188 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 RASL12Q9NYN1 266 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 MAB21L2Q9Y586 359 aa12.58□□□□□ -0.4
SKA3-204ENST00000462482 TMEM269A0A1B0GVZ9 245 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 OR5B21A6NL26 309 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 SLC1A7O00341 560 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 TFF1P04155 84 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 PSG2P11465 335 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 HOXB6P17509 224 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms