RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CLEC1BQ9P126 229 aa16.23■□□□□ 0.19
HPS3-204ENST00000462030 C14orf166Q9Y224 244 aaKnown RBP16.23■□□□□ 0.19
HPS3-204ENST00000462030 LSM5Q9Y4Y9 91 aaKnown RBP16.23■□□□□ 0.19
HPS3-204ENST00000462030 KPTNQ9Y664 436 aa16.23■□□□□ 0.19
HPS3-204ENST00000462030 RTTNQ86VV8 2226 aa16.23■□□□□ 0.19
HPS3-204ENST00000462030 VSTM2BA6NLU5 285 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 UBE2CO00762 179 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 PGA4P0DJD7 388 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 PGA3P0DJD8 388 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 GABREP78334 506 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 C17orf67Q0P5P2 114 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 MYBPHQ13203 477 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 CHRFAM7AQ494W8 412 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 AWAT1Q58HT5 328 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 Q6ZS52 159 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 GKN2Q86XP6 184 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 ERGIC1Q969X5 290 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 ZDHHC12Q96GR4 267 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 CHRNA10Q9GZZ6 450 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 C1orf123Q9NWV4 160 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 MED12Q93074 2177 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 TRIOO75962 3097 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 A0A1W2PNV4 684 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 DEDDO75618 318 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 S100A6P06703 90 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 SNRNP70P08621 437 aaKnown RBP16.22■□□□□ 0.19
HPS3-204ENST00000462030 SMIM6P0DI80 62 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 DAOP14920 347 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 SERPINA2P20848 420 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 THBS4P35443 961 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 LCN10Q6JVE6 187 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 ZNF283Q8N7M2 679 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 LYPD6BQ8NI32 183 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 MRPL24Q96A35 216 aaKnown RBP16.22■□□□□ 0.19
HPS3-204ENST00000462030 BSCL2Q96G97 398 aaPredicted RBP16.22■□□□□ 0.19
HPS3-204ENST00000462030 PRRX2Q99811 253 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 POMT1Q9Y6A1 747 aa16.22■□□□□ 0.19
HPS3-204ENST00000462030 RALGAPA1Q6GYQ0 2036 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 A6NLC8 198 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 NME2P1O60361 137 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 JTBO76095 146 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 GAPDHP04406 335 aaKnown RBP16.21■□□□□ 0.19
HPS3-204ENST00000462030 FABP1P07148 127 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 FOLR1P15328 257 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 CCL1P22362 96 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 ARL4DP49703 201 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 KISS1Q15726 138 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 MIDNQ504T8 468 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 UEVLDQ8IX04 471 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 FNDC9Q8TBE3 224 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 C20orf24Q9BUV8 137 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 UNC13CQ8NB66 2214 aa16.21■□□□□ 0.19
HPS3-204ENST00000462030 SCGB1D2O95969 90 aa16.21■□□□□ 0.18
HPS3-204ENST00000462030 NME1P15531 152 aaKnown RBP16.21■□□□□ 0.18
HPS3-204ENST00000462030 EN2P19622 333 aaPredicted RBP16.21■□□□□ 0.18
HPS3-204ENST00000462030 DOK3Q7L591 496 aa16.21■□□□□ 0.18
HPS3-204ENST00000462030 SEMA6DQ8NFY4 1073 aa16.21■□□□□ 0.18
HPS3-204ENST00000462030 OR9K2Q8NGE7 335 aa16.21■□□□□ 0.18
HPS3-204ENST00000462030 OR14K1Q8NGZ2 314 aa16.21■□□□□ 0.18
HPS3-204ENST00000462030 ZMAT5Q9UDW3 170 aaKnown RBP16.21■□□□□ 0.18
HPS3-204ENST00000462030 A0A1W2PPH5 198 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 C7orf77A4D0Y5 90 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 ZNF814B7Z6K7 855 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 STMND1H3BQB6 276 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 ZNF84P51523 738 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 GGNBP1Q5YKI7 109 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 DTX1Q86Y01 620 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 SHDQ96IW2 340 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 ZNF2Q9BSG1 426 aaPredicted RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 HDHD3Q9BSH5 251 aaPredicted RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.2■□□□□ 0.18
HPS3-204ENST00000462030 GSN-AS1Q9NRJ2 163 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 MCTS1Q9ULC4 181 aaKnown RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 STARD10Q9Y365 291 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 NCOA6Q14686 2063 aaPredicted RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 A0A1W2PNR3 127 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 DHRS7CA6NNS2 312 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 TSPAN15O95858 294 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 IGHG1P01857 330 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 S100A8P05109 93 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 AGAP20933 346 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 OR1D5P58170 312 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 SURF2Q15527 256 aaPredicted RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 NSUN5P2Q63ZY6 315 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 OPN5Q6U736 354 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.2■□□□□ 0.18
HPS3-204ENST00000462030 PISDQ9UG56 409 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 CEP290O15078 2479 aa16.2■□□□□ 0.18
HPS3-204ENST00000462030 TRAF3IP2O43734 574 aaPredicted RBP16.19■□□□□ 0.18
HPS3-204ENST00000462030 IGLV3-19P01714 112 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 MT-ND4LP03901 98 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 SNCAP37840 140 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 FAM3AP98173 230 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 FABP9Q0Z7S8 132 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 FAM189A2Q15884 450 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 KRBOX4Q5JUW0 171 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 SULF2Q8IWU5 870 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 LYZL4Q96KX0 146 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 ZNF251Q9BRH9 671 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms