RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ZNF205O95201 554 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-229ENST00000460826 MAP2K4P45985 399 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 GPM6AP51674 278 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 SLC3A1Q07837 685 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 LOXL1Q08397 574 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-229ENST00000460826 ZNF154Q13106 437 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 CEACAM21Q3KPI0 293 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 OR13C3Q8NGS6 347 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 PGLYRP3Q96LB9 341 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 MND1Q9BWT6 205 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 COMMD4Q9H0A8 199 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 METTL17Q9H7H0 456 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-229ENST00000460826 ABCB9Q9NP78 766 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
HDLBP-229ENST00000460826 WNK2Q9Y3S1 2297 aa11.77□□□□□ -0.52
HDLBP-229ENST00000460826 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.52
HDLBP-229ENST00000460826 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 A6NLC8 198 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 IGHV2-70P01814 119 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF12P17014 697 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.53
HDLBP-229ENST00000460826 IL2RGP31785 369 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 CDH15P55291 814 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 GABARAPL2P60520 117 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 MZT1Q08AG7 82 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF181Q2M3W8 571 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 FAM76BQ5HYJ3 339 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 KCTD8Q6ZWB6 473 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 OR5A2Q8NGI9 324 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 CLDND2Q8NHS1 167 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 NPRL2Q8WTW4 380 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 GHSRQ92847 366 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 RPL3LQ92901 407 aaKnown RBP11.77□□□□□ -0.53
HDLBP-229ENST00000460826 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 SMR3AQ99954 134 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 TLNRD1Q9H1K6 362 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 BLOC1S6Q9UL45 172 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 LRRC42Q9Y546 428 aa11.77□□□□□ -0.53
HDLBP-229ENST00000460826 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.53
HDLBP-229ENST00000460826 IGKV1-9A0A0C4DH69 117 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 PQLC2LA1A4F0 135 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 IFNL4K9M1U5 179 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 CDIPTO14735 213 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 INHBBP09529 407 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF20P17024 532 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 EGR1P18146 543 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 CELP19835 753 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 CD80P33681 288 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 SOX2P48431 317 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 TAS2R43P59537 309 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
HDLBP-229ENST00000460826 GNG3P63215 75 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 ACSM1Q08AH1 577 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 SPHARQ15513 63 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 MED22Q15528 200 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 GCSAMQ8N6F7 178 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
HDLBP-229ENST00000460826 SCCPDHQ8NBX0 429 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 OR11L1Q8NGX0 322 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 TRMT10AQ8TBZ6 339 aaKnown RBP11.76□□□□□ -0.53
HDLBP-229ENST00000460826 TSEN15Q8WW01 171 aaKnown RBP11.76□□□□□ -0.53
HDLBP-229ENST00000460826 RAB1CQ92928 201 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 C10orf35Q96D05 121 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 TIMD4Q96H15 378 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
HDLBP-229ENST00000460826 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 DHDHQ9UQ10 334 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF281Q9Y2X9 895 aa11.76□□□□□ -0.53
HDLBP-229ENST00000460826 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-229ENST00000460826 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 TRBV5-5A0A0J9YX44 114 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 hCG_1807616A0A1W2PRN6 198 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 ISPDA4D126 451 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 OR5B21A6NL26 309 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 LRRC30A6NM36 301 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 PLPP2O43688 288 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 GATBO75879 557 aaKnown RBP11.75□□□□□ -0.53
HDLBP-229ENST00000460826 LMO4P61968 165 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 BTG1P62324 171 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 BDH1Q02338 343 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 UTS2BQ765I0 119 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 RNF144BQ7Z419 303 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 OR13C9Q8NGT0 318 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 GPR148Q8TDV2 347 aa11.75□□□□□ -0.53
HDLBP-229ENST00000460826 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms