RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 POC1BQ8TC44 478 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 RAB18Q9NP72 206 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-205ENST00000460170 LIPT2A6NK58 231 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 SLC22A20A6NK97 555 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.31
PTPRU-205ENST00000460170 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.31
PTPRU-205ENST00000460170 HLA-HP01893 362 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 MT-ND4LP03901 98 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 CBR1P16152 277 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 NFYBP25208 207 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 OR3A4PP47883 348 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 SELENOPP49908 381 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 OR10AC1Q8NH08 325 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 TRIB1Q96RU8 372 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 OPA3Q9H6K4 179 aa13.15□□□□□ -0.31
PTPRU-205ENST00000460170 LIN7CQ9NUP9 197 aaKnown RBP13.15□□□□□ -0.31
PTPRU-205ENST00000460170 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 FIGNL2A6NMB9 653 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 HMSDA8MTL9 139 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 DCTN6O00399 190 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 CDC14BO60729 498 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 IGKV1D-16P01601 117 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
PTPRU-205ENST00000460170 NAA40Q86UY6 237 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF808Q8N4W9 903 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-205ENST00000460170 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 LANCL1O43813 399 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 BGLAPP02818 100 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SULT1A3P0DMM9 295 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SULT1A4P0DMN0 295 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF32P17041 273 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 PTAFRP25105 342 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 RAB1AP62820 205 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 ACER2Q5QJU3 275 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 PRAMEF5Q5TYX0 476 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 PRAMEF6Q5VXH4 476 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 DGAT2L6Q6ZPD8 337 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 Q7L0L9 218 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 CATSPERDQ86XM0 798 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 RASL10BQ96S79 203 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SFT2D2O95562 160 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 DUS4LO95620 317 aaKnown RBP13.14□□□□□ -0.31
PTPRU-205ENST00000460170 GLRA1P23415 457 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 URGCP-MRPS24S4R325 110 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 HPXP02790 462 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 FLI1Q01543 452 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-205ENST00000460170 KLF9Q13886 244 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-205ENST00000460170 HAGHQ16775 308 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 SP6Q3SY56 376 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 GVQW1Q8N7I0 195 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 HGDQ93099 445 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 PRRX2Q99811 253 aa13.14□□□□□ -0.31
PTPRU-205ENST00000460170 OR5H15A6NDH6 313 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 CYB5BO43169 146 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 LRRTM1Q86UE6 522 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 ZFP82Q8N141 532 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 CCDC187A0A096LP49 1063 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 TSTD3H0UI37 97 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 GPM6AP51674 278 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 ZFP62Q8NB50 900 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-205ENST00000460170 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 OR1C1Q15619 314 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 OR2B11Q5JQS5 317 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 C6orf201Q7Z4U5 140 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
PTPRU-205ENST00000460170 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 GPR31O00270 319 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 MPC2O95563 127 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 ZP3P21754 424 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 OR8B12Q8NGG6 310 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 CYB5R1Q9UHQ9 305 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 RNF150Q9ULK6 438 aa13.13□□□□□ -0.31
PTPRU-205ENST00000460170 MDFIC2A0A1B0GVS7 189 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 LRRC30A6NM36 301 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 SRD5A2P31213 254 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
PTPRU-205ENST00000460170 GGTLC2Q14390 218 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 COL13A1Q5TAT6 717 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-205ENST00000460170 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ADPRHL1Q8NDY3 354 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
PTPRU-205ENST00000460170 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms