RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 IGHV4-34P06331 123 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 LINC00614P0C842 121 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 HKR1P10072 659 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 PMELP40967 661 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 NPY4RP50391 375 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 DVL1P1P54792 670 aaPredicted RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 F2RL1P55085 397 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 TMEM50BP56557 158 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 HGFACQ04756 655 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 PLCXD2Q0VAA5 305 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 RAB32Q13637 225 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 SURF2Q15527 256 aaPredicted RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 SLC9A3R2Q15599 337 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 HMGN3Q15651 99 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ZNF542PQ5EBM4 170 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 COX15Q7KZN9 410 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 SLC29A4Q7RTT9 530 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ZFP82Q8N141 532 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ZNF441Q8N8Z8 693 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 OR10S1Q8NGN2 331 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 OR13C9Q8NGT0 318 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 OR51F2Q8NH61 342 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 MFSD8Q8NHS3 518 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 KCNG3Q8TAE7 436 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 SSC4DQ8WTU2 575 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 TSLPQ969D9 159 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 RAB3CQ96E17 227 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 NECAB3Q96P71 396 aaPredicted RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 CRB3Q9BUF7 120 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 FOXQ1Q9C009 403 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 NRSN2Q9GZP1 204 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 WWTR1Q9GZV5 400 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 TUBA4BQ9H853 241 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 MOB1AQ9H8S9 216 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 TAF9BQ9HBM6 251 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ASCL3Q9NQ33 180 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 CACFD1Q9UGQ2 172 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 KIAA1549Q9HCM3 1950 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 CDC14CA4D256 554 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 NPIPA5E9PKD4 350 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 SOCS1O15524 211 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 MED6O75586 246 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 SEMA4FO95754 770 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 CTSEP14091 401 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 RCC1P18754 421 aaPredicted RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 IL11P20809 199 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 AGAP20933 346 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 FASLGP48023 281 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 ZNF84P51523 738 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 UCP2P55851 309 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 NUTF2P61970 127 aaKnown RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 C9orf50Q5SZB4 431 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 RPL7L1Q6DKI1 246 aaKnown RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 GLIPR1L1Q6UWM5 242 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 DHRS11Q6UWP2 260 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 H1FNTQ75WM6 255 aaPredicted RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 ZNF101Q8IZC7 436 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 TDHQ8IZJ6 230 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 OR5AS1Q8N127 324 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 FAM89BQ8N5H3 189 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 TMEM104Q8NE00 496 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 OR5H2Q8NGV7 314 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 OR13G1Q8NGZ3 307 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 KIRREL1Q96J84 757 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 TAAR9Q96RI9 348 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 OR2S2Q9NQN1 319 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 CENPMQ9NSP4 180 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 METTL1Q9UBP6 276 aaKnown RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 NPIPA1Q9UND3 350 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 MRPS28Q9Y2Q9 187 aaKnown RBP7.5□□□□□ -1.21
VPS50-208ENST00000458707 MEMO1Q9Y316 297 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 KPTNQ9Y664 436 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 KNL1Q8NG31 2342 aa7.5□□□□□ -1.21
VPS50-208ENST00000458707 LILRA5A6NI73 299 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 FOXI3A8MTJ6 420 aaPredicted RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 C1orf196B1AJZ1 125 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 B4DGG1 531 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 C9JQL5 133 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 H3BMH7 237 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ITGB1BP1O14713 200 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 RAD51DO75771 328 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 MT-ND4LP03901 98 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ZNF44P15621 663 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 PAX1P15863 534 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 BCKDHBP21953 392 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CCL1P22362 96 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ADH6P28332 368 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 CCR5P51681 352 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 EFNA3P52797 238 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 HSD11B2P80365 405 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 MRPS21P82921 87 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 FAM3AP98173 230 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 HSF1Q00613 529 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 GAGE1Q13065 139 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 EIF3IQ13347 325 aaKnown RBP7.49□□□□□ -1.21
VPS50-208ENST00000458707 C1orf61Q13536 156 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 ACER2Q5QJU3 275 aa7.49□□□□□ -1.21
VPS50-208ENST00000458707 HLA-DQA1Q5Y7H0 255 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms