RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CCL13Q99616 98 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 NUDT16L1Q9BRJ7 211 aaKnown RBP15.58■□□□□ 0.08
USP39-209ENST00000458268 RNPEPL1Q9HAU8 725 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 OPN4Q9UHM6 478 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 IGHV2-70DA0A0C4DH43 119 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 ERICH4A6NGS2 130 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 J3QLW9 94 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 TMPRSS2O15393 492 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 SYT7O43581 403 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 TFF1P04155 84 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 ATP6V1B1P15313 513 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 ZNF19P17023 458 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 PEX2P28328 305 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 GNG3P63215 75 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 SCGB2A2Q13296 93 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 WDR38Q5JTN6 314 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 HAGHLQ6PII5 290 aaPredicted RBP15.57■□□□□ 0.08
USP39-209ENST00000458268 DOK3Q7L591 496 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 BATF2Q8N1L9 274 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 BPIFB2Q8N4F0 458 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 LGALS12Q96DT0 336 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 Q96MT0 163 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 WDR13Q9H1Z4 485 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 SMURF1Q9HCE7 757 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 CUBNO60494 3623 aa15.57■□□□□ 0.08
USP39-209ENST00000458268 SVEP1Q4LDE5 3571 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 A0A1B0GTI1 187 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 A0A1B0GW55 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 MPZL2O60487 215 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 RHBDL1O75783 438 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 SULT1C4O75897 302 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 CLIC3O95833 236 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 IGLV3-1P01715 115 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L2P0CJ85 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L3P0CJ86 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L4P0CJ87 422 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L5P0CJ88 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L6P0CJ89 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L7P0CJ90 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DBTP11182 482 aaKnown RBP15.56■□□□□ 0.08
USP39-209ENST00000458268 OR12D2P58182 307 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 IKZF1Q13422 519 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 CEACAM21Q3KPI0 293 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 CLVS2Q5SYC1 327 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4L9Q6RFH8 374 aaPredicted RBP15.56■□□□□ 0.08
USP39-209ENST00000458268 LHFPL3Q86UP9 236 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 FGFRL1Q8N441 504 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 FAM216BQ8N7L0 139 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 OR14K1Q8NGZ2 314 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 RAB40AQ8WXH6 277 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 TMEM158Q8WZ71 300 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 SLC6A7Q99884 636 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 DUX4Q9UBX2 424 aa15.56■□□□□ 0.08
USP39-209ENST00000458268 ATRQ13535 2644 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 PPIAL4CA0A0B4J2A2 164 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 LOC107986453A0A1B0GWG9 222 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 SRRM5B3KS81 715 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 DVL1O14640 695 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 INMTO95050 263 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 LHBP01229 141 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 HTR1AP08908 422 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 GLRA1P23415 457 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 KIR3DL2P43630 455 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 RDH10Q8IZV5 341 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 PRSS35Q8N3Z0 413 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 ACBD7Q8N6N7 88 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 ZNF418Q8TF45 676 aaPredicted RBP15.55■□□□□ 0.08
USP39-209ENST00000458268 C4orf36Q96KX1 117 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 PCDHGB1Q9Y5G3 927 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 V9GYS6 101 aa15.55■□□□□ 0.08
USP39-209ENST00000458268 FAM230AA0A1W2PPH8 454 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 NKX6-3A6NJ46 265 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 OR5B21A6NL26 309 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 C22orf46C9J442 243 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 E9PQ18 207 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 SLC16A6O15403 523 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 NDUFA2O43678 99 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 FSTL3O95633 263 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 PLATP00750 562 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 GABRB1P18505 474 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 GABRA2P47869 451 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 KRTAP24-1Q3LI83 254 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 SLC25A30Q5SVS4 291 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 ZBTB37Q5TC79 503 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 TEX36Q5VZQ5 186 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 ZNF841Q6ZN19 808 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 PHC2Q8IXK0 858 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 OR5A2Q8NGI9 324 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 RHOXF1Q8NHV9 184 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 H1FXQ92522 213 aaKnown RBP15.54■□□□□ 0.08
USP39-209ENST00000458268 MRPL48Q96GC5 212 aaKnown RBP15.54■□□□□ 0.08
USP39-209ENST00000458268 ZNF488Q96MN9 340 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 ALG8Q9BVK2 526 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 TLNRD1Q9H1K6 362 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 MYRFQ9Y2G1 1151 aa15.54■□□□□ 0.08
USP39-209ENST00000458268 POLR3KQ9Y2Y1 108 aaPredicted RBP15.54■□□□□ 0.08
USP39-209ENST00000458268 TRAV40A0A0B4J280 105 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.53■□□□□ 0.08
USP39-209ENST00000458268 ENSAO43768 121 aaKnown RBP15.53■□□□□ 0.08
USP39-209ENST00000458268 FADS2O95864 444 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms