RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 V9GYS6 101 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 LOC400499M0QZD8 3231 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 ZNF292O60281 2723 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 CLN3Q13286 438 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 MEF2DQ14814 521 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 FAM189A2Q15884 450 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 LYPD6Q86Y78 171 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
CLK3-203ENST00000454830 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 METTL9Q9H1A3 318 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 SPTA1P02549 2419 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 ZNF850A8MQ14 1090 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 IL32P24001 234 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 ZP1P60852 638 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 SSBP1Q04837 148 aaKnown RBP11.89□□□□□ -0.51
CLK3-203ENST00000454830 MALLQ13021 153 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 PLAC9Q5JTB6 97 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 PRRT1Q99946 306 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 DLL4Q9NR61 685 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 MEIKINA0A087WXM9 373 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 SDCBPO00560 298 aaPredicted RBP11.88□□□□□ -0.51
CLK3-203ENST00000454830 SLC22A5O76082 557 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 PRF1P14222 555 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 QRFPP83859 136 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 HLXQ14774 488 aaPredicted RBP11.88□□□□□ -0.51
CLK3-203ENST00000454830 C6orf201Q7Z4U5 140 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 STEAP2Q8NFT2 490 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 C1QTNF6Q9BXI9 259 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 PRR14LQ5THK1 2151 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 PRKACBP22694 351 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 CPT2P23786 658 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 CLVS2Q5SYC1 327 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 KCTD9Q7L273 389 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 OR56B2PQ8NGI1 322 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 OR5H2Q8NGV7 314 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 PTTG3PQ9NZH4 202 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 IGKV3D-15A0A087WSY6 115 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 FXYD6-FXYD2A0A087WZ82 144 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 LRP3O75074 770 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 HLA-AP01891 365 aaKnown RBP11.88□□□□□ -0.51
CLK3-203ENST00000454830 APLNRP35414 380 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 ZNF626Q68DY1 528 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 OR11H4Q8NGC9 324 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
CLK3-203ENST00000454830 OR6C65A6NJZ3 312 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 RAD51DO75771 328 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 ZNF35P13682 527 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 ATP1B3P54709 279 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 TMEM50BP56557 158 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 PER3P56645 1201 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 SPATA46Q5T0L3 261 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 CDH24Q86UP0 819 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
CLK3-203ENST00000454830 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
CLK3-203ENST00000454830 ACKR4Q9NPB9 350 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 FAM221AA4D161 298 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 OR4E1P0C645 316 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 PI3P19957 117 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
CLK3-203ENST00000454830 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 LRRC37A5PQ49AS3 106 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 WDYHV1Q96HA8 205 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 KCNN3Q9UGI6 736 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 KLK10O43240 276 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 XRCC2O43543 280 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
CLK3-203ENST00000454830 NPY4RP50391 375 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 FAM3AP98173 230 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 CHRFAM7AQ494W8 412 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 HIST1H2AAQ96QV6 131 aa11.87□□□□□ -0.51
CLK3-203ENST00000454830 PIEZO2Q9H5I5 2752 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 NGFP01138 241 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 IL5P05113 134 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 MMP7P09237 267 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 DNM1P46Q6ZS02 220 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 OR51F2Q8NH61 342 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 WDR89Q96FK6 387 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 SSX5O60225 188 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 LYZL6O75951 148 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 WISP2O76076 250 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 EDN3P14138 238 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 UBE2NP61088 152 aaKnown RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 BAMBIQ13145 260 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 BCL2A1Q16548 175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms