RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 TMEM244Q5VVB8 128 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 LAIR2Q6ISS4 152 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 TMPRSS11AQ6ZMR5 421 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 KRT74Q7RTS7 529 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF676Q8N7Q3 588 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 CCDC54Q8NEL0 328 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 OR5A2Q8NGI9 324 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM80Q96HE8 168 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 HIF1ANQ9NWT6 349 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
TOP3B-211ENST00000449704 EXOSC1Q9Y3B2 195 aaKnown RBP13.17□□□□□ -0.3
TOP3B-211ENST00000449704 NF1P21359 2839 aa13.17□□□□□ -0.3
TOP3B-211ENST00000449704 E9PI62 339 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 RPS2P15880 293 aaKnown RBP13.16□□□□□ -0.3
TOP3B-211ENST00000449704 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-211ENST00000449704 GMFBP60983 142 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 LCN2P80188 198 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 MED21Q13503 144 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 CR1LQ2VPA4 569 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM42Q69YG0 159 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 WDR82Q6UXN9 313 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 IZUMO2Q6UXV1 221 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 Q6ZSR3 168 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 GCSAMQ8N6F7 178 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 SCCPDHQ8NBX0 429 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 FBLIM1Q8WUP2 373 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 TLNRD1Q9H1K6 362 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 CLEC2DQ9UHP7 191 aa13.16□□□□□ -0.3
TOP3B-211ENST00000449704 CAB39Q9Y376 341 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-211ENST00000449704 IGHV3OR15-7A0A075B7D8 119 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 TRAV20A0A0B4J274 112 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 OOEPA6NGQ2 149 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 OR5B21A6NL26 309 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 OR4C45A6NMZ5 311 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 CRLF1O75462 422 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 FSTL3O95633 263 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 WNT2P09544 360 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 ZNF12P17014 697 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-211ENST00000449704 EGR1P18146 543 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
TOP3B-211ENST00000449704 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
TOP3B-211ENST00000449704 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 OR2G6Q5TZ20 316 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-211ENST00000449704 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 AHSA2Q719I0 299 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 STX19Q8N4C7 294 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 BEX2Q9BXY8 128 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 OR51I2Q9H344 312 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 CNOT2Q9NZN8 540 aaKnown RBP13.15□□□□□ -0.3
TOP3B-211ENST00000449704 PSORS1C1Q9UIG5 152 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.3
TOP3B-211ENST00000449704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.14□□□□□ -0.311e-10■■■■□ 22.5
TOP3B-211ENST00000449704 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ANK3Q12955 4377 aaKnown RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ANKRD61A6NGH8 418 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 F5H0A9 414 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 FOXH1O75593 365 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 SERPINA3P01011 423 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 LHBP01229 141 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 GYPAP02724 150 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ISG15P05161 165 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 CCDC159P0C7I6 412 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ZNF20P17024 532 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 PCMT1P22061 227 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 CFHR2P36980 270 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 CHRFAM7AQ494W8 412 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 ESCO2Q56NI9 601 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 C6orf141Q5SZD1 244 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 FAM120AOSQ5T036 256 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 OR8B3Q8NGG8 313 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 OR5AK2Q8NH90 309 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 TRMT10AQ8TBZ6 339 aaKnown RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 FGGYQ96C11 551 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-211ENST00000449704 OR8B2Q96RD0 313 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
TOP3B-211ENST00000449704 PLCXD1Q9NUJ7 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms