RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SLC25A1P53007 311 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 RAB4BP61018 213 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 MRPL38Q96DV4 380 aaKnown RBP11.04□□□□□ -0.64
UBE3B-204ENST00000449510 VSTM2LQ96N03 204 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 PLK3Q9H4B4 646 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 DOCK8Q8NF50 2099 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 FAM221BA6H8Z2 402 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 LGI3Q8N145 548 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 OR14L1PQ8NHC6 308 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 HIST1H2BAQ96A08 127 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
UBE3B-204ENST00000449510 RCC2Q9P258 522 aaKnown RBP11.04□□□□□ -0.64
UBE3B-204ENST00000449510 SCN8AQ9UQD0 1980 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 TSC2P49815 1807 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 PSME4Q14997 1843 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 ABCA1O95477 2261 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 PLXND1Q9Y4D7 1925 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 FGF8P55075 233 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 INSM1Q01101 510 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 HMGN3Q15651 99 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 OR8G2PQ6IF36 304 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZDHHC22Q8N966 263 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 TMEM184BQ9Y519 407 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 A0A1W2PPE3 182 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 OR5AC1P0C628 307 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 MMP9P14780 707 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 HIST1H1DP16402 221 aaKnown RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 HNF1AP20823 631 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 SRYQ05066 204 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 MFAP5Q13361 173 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 PHF19Q5T6S3 580 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 OR2AE1Q8NHA4 323 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 EMG1Q92979 244 aaKnown RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 SLC46A1Q96NT5 459 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 NKX2-4Q9H2Z4 354 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF275Q9NSD4 429 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 CNOT1A5YKK6 2376 aaKnown RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 GEMIN2O14893 280 aaKnown RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 GNRH1P01148 92 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ANKRD55Q3KP44 614 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 LANCL3Q6ZV70 420 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 LYZL2Q7Z4W2 148 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF610Q8N9Z0 462 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 FGF14Q92915 247 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZDHHC12Q96GR4 267 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 SOX7Q9BT81 388 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 EDEM2Q9BV94 578 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 C5orf42Q9H799 3197 aa11.03□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF816-ZNF321PA0A0X1KG74 233 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 RAB27BO00194 218 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 PATE4P0C8F1 98 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 HAAOP46952 286 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 CSNK1A1P48729 337 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 RARRES2Q99969 163 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 S1PR5Q9H228 398 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 WSB1Q9Y6I7 421 aa11.02□□□□□ -0.64
UBE3B-204ENST00000449510 TRBV11-1A0A0K0K1C0 115 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 OR2J2O76002 312 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 PPICP45877 212 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 GRINAQ7Z429 371 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 ATG4DQ86TL0 474 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-204ENST00000449510 OR4A4PQ8NGN8 299 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 KLHDC3Q9BQ90 382 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 LAMP3Q9UQV4 416 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 KIR2DS5A0A0G2JLQ3 304 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 A0A0G2JNG1 304 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 KIR2DS3K7RE56 304 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 GPR137BO60478 399 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 DDAH2O95865 285 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 KIR2DS5Q14953 304 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 EMC4Q5J8M3 183 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 ZNF611Q8N823 705 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-204ENST00000449510 ALX4Q9H161 411 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-204ENST00000449510 PLXNB2O15031 1838 aa11.02□□□□□ -0.65
UBE3B-204ENST00000449510 BRWD3Q6RI45 1802 aa11.01□□□□□ -0.65
UBE3B-204ENST00000449510 TAAR5O14804 337 aa11.01□□□□□ -0.65
UBE3B-204ENST00000449510 IAPPP10997 89 aa11.01□□□□□ -0.65
UBE3B-204ENST00000449510 PPP1CCP36873 323 aaKnown RBP11.01□□□□□ -0.65
UBE3B-204ENST00000449510 SLC35A1P78382 337 aa11.01□□□□□ -0.65
UBE3B-204ENST00000449510 MALLQ13021 153 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms