RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZNF672Q499Z4 452 aaPredicted RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 IDNKQ5T6J7 187 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 VHLLQ6RSH7 139 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 Q6ZR03 302 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 JAGN1Q8N5M9 183 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 SPERTQ8NA61 448 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 OR13G1Q8NGZ3 307 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 LILRB1Q8NHL6 650 aaPredicted RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 PIK3IP1Q96FE7 263 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 FGF23Q9GZV9 251 aaPredicted RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 PLGRKTQ9HBL7 147 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 CYSLTR2Q9NS75 346 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 MYEF2Q9P2K5 600 aaKnown RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 DUSP13Q9UII6 198 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 ROS1P08922 2347 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 ABCA4P78363 2273 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 OR4A8P0C604 315 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 NAT2P11245 290 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 ZP1P60852 638 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 EFNB3Q15768 340 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 HES5Q5TA89 166 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 PNLDC1Q8NA58 520 aaKnown RBP16.43■□□□□ 0.22
RPS28-202ENST00000449223 OR4D6Q8NGJ1 314 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 HIST1H2AAQ96QV6 131 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 ADAT1Q9BUB4 502 aaKnown RBP16.43■□□□□ 0.22
RPS28-202ENST00000449223 LIN7BQ9HAP6 207 aa16.43■□□□□ 0.22
RPS28-202ENST00000449223 HRNRQ86YZ3 2850 aaPredicted RBP16.42■□□□□ 0.22
RPS28-202ENST00000449223 MLNRO43193 412 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 APOBEC3AP31941 199 aaPredicted RBP16.42■□□□□ 0.22
RPS28-202ENST00000449223 ATP1B3P54709 279 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 MTCP1P56278 107 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 GNG3P63215 75 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 RAB11BQ15907 218 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 MZT2AQ6P582 158 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 RNF144BQ7Z419 303 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 NPRL2Q8WTW4 380 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 CMTM3Q96MX0 182 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 SPACA5Q96QH8 159 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 SYT3Q9BQG1 590 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 PLK3Q9H4B4 646 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 SMURF1Q9HCE7 757 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 GHRLQ9UBU3 117 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 SPATA2Q9UM82 520 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 ETV7Q9Y603 341 aa16.42■□□□□ 0.22
RPS28-202ENST00000449223 PLAUP00749 431 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 ADH4P08319 380 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 SERPINF1P36955 418 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 BMXP51813 675 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 DMRTC1Q5HYR2 192 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 ASCL4Q6XD76 172 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 MEX3BQ6ZN04 569 aaKnown RBP16.41■□□□□ 0.22
RPS28-202ENST00000449223 OR6Q1Q8NGQ2 317 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 TRMT10AQ8TBZ6 339 aaKnown RBP16.41■□□□□ 0.22
RPS28-202ENST00000449223 TBC1D15Q8TC07 691 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 C1orf147Q96MC9 270 aaPredicted RBP16.41■□□□□ 0.22
RPS28-202ENST00000449223 DHRS9Q9BPW9 319 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 MICU1Q9BPX6 476 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 RTL8AQ9BWD3 113 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 C6orf62Q9GZU0 229 aaPredicted RBP16.41■□□□□ 0.22
RPS28-202ENST00000449223 FBLN5Q9UBX5 448 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 PEX16Q9Y5Y5 336 aa16.41■□□□□ 0.22
RPS28-202ENST00000449223 SPTAN1Q13813 2472 aaKnown RBP16.41■□□□□ 0.22
RPS28-202ENST00000449223 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.4■□□□□ 0.22
RPS28-202ENST00000449223 FAM230AA0A1W2PPH8 454 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 PLSCR5A0PG75 271 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 FAM221AA4D161 298 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 TMEM210A6NLX4 147 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 PTBP3O95758 552 aaKnown RBP16.4■□□□□ 0.22
RPS28-202ENST00000449223 BPNT1O95861 308 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 PTGFRP43088 359 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 GPM6AP51674 278 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 LSAMPQ13449 338 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 OR8G1Q15617 311 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 OR8S1Q8NH09 359 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 FAM3DQ96BQ1 224 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 WDFY2Q96P53 400 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
RPS28-202ENST00000449223 TAAR3PQ9P1P4 343 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 TENM4Q6N022 2769 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ZSCAN5BA6NJL1 495 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 A6NNC1 897 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ZNF732B4DXR9 585 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 PRSS44E7EML9 344 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 CTDSP2O14595 271 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 LDLRAD4O15165 306 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 PAHP00439 452 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 UBBP0CG47 229 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 MPZP25189 248 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 OR3A4PP47883 348 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 CLDN12P56749 244 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ANGPTL5Q86XS5 388 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 CELF2-AS1Q8N7Q2 184 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ZSCAN4Q8NAM6 433 aaPredicted RBP16.4■□□□□ 0.22
RPS28-202ENST00000449223 PXT1Q8NFP0 134 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 ZNF671Q8TAW3 534 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 LGALS14Q8TCE9 139 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 NEUROG1Q92886 237 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 DVL3Q92997 716 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms