RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SLC35E3Q7Z769 313 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 CATSPERDQ86XM0 798 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 CALHM1Q8IU99 346 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 KRTCAP2Q8N6L1 136 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 C5orf56Q8N8D9 126 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 ZNRF1Q8ND25 227 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 OR1F12Q8NHA8 337 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 BBS10Q8TAM1 723 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 UBE2E2Q96LR5 201 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 TLNRD1Q9H1K6 362 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 TUBB1Q9H4B7 451 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 GNB4Q9HAV0 340 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 POLE4Q9NR33 117 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 RPS6KB2Q9UBS0 482 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 DNAJB9Q9UBS3 223 aa2.45□□□□□ -2.02
PMS1-215ENST00000447232 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.45□□□□□ -2.02
PMS1-215ENST00000447232 A0A0B4J2E0 115 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 A0A1B0GX12 115 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 KRTAP29-1A8MX34 341 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 TMEM114B3SHH9 223 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 H3BQF6 201 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 RBP4P02753 201 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 RAP2AP10114 183 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 BRS3P32247 399 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 ANP32AP39687 249 aaKnown RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 RPL31P62899 125 aaKnown RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 TXNL4AP83876 142 aaKnown RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 RSPO1Q2MKA7 263 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 KRTAP27-1Q3LI81 207 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 CCDC92Q53HC0 331 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 C8orf74Q6P047 294 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 SMARCD3Q6STE5 483 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 CFAP77Q6ZQR2 320 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 Q6ZR54 194 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 HDDC2Q7Z4H3 204 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 TMEM139Q8IV31 216 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 FOXRED2Q8IWF2 684 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 LRRC34Q8IZ02 419 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 PGAM4Q8N0Y7 254 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 C10orf53Q8N6V4 93 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR4P4Q8NGL7 312 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR4C12Q96R67 309 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 AIFM2Q9BRQ8 373 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 WDR13Q9H1Z4 485 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR51J1Q9H342 316 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 SNTG1Q9NSN8 517 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 ZNF222Q9UK12 451 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 STUB1Q9UNE7 303 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 DSCAML1Q8TD84 2053 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 IGKV1D-17A0A075B6S4 117 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 A0A1W2PPM1 405 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 NPIPB13A6NJU9 1138 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 CD300LBA8K4G0 201 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 NPIPB4C9JG80 1138 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 EIF3HO15372 352 aaKnown RBP eCLIP2.44□□□□□ -2.02
PMS1-215ENST00000447232 FGF16O43320 207 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 NR2F1P10589 423 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 NR2C1P13056 603 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 ATP5F1P24539 256 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 GRK5P34947 590 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 CSNK2BP67870 215 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 CEP85LQ5SZL2 805 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR4F3Q6IEY1 312 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 LCN8Q6JVE9 175 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 ZNF529Q6P280 563 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 GTSCR1Q86UQ5 136 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 LNX2Q8N448 690 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 DPP10Q8N608 796 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 ZNF491Q8N8L2 437 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR1M1Q8NGA1 313 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 OR4A15Q8NGL6 344 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 NDNFQ8TB73 568 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 SPRYD4Q8WW59 207 aaPredicted RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 STMN2Q93045 179 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 GON7Q9BXV9 100 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 RABEP2Q9H5N1 569 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 ARMC7Q9H6L4 198 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 PLEKHA3Q9HB20 300 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 C14orf119Q9NWQ9 140 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 STX18Q9P2W9 335 aaKnown RBP2.44□□□□□ -2.02
PMS1-215ENST00000447232 ZNF229Q9UJW7 825 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 A4GNTQ9UNA3 340 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 FBXO7Q9Y3I1 522 aa2.44□□□□□ -2.02
PMS1-215ENST00000447232 A0A1W2PRG6 482 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A18PA6NE21 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A16PA6NEW6 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A20PA6NIJ5 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A9PA6NNJ1 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A12PA8MX19 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A5PA8MXJ8 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 MCIDASD6RGH6 385 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 M0R2N4 97 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FMO6PO60774 539 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 RGS11O94810 467 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 TSPAN19P0C672 248 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A15PP0C7V4 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A13PP0C7W8 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A14PP0C7W9 464 aa2.43□□□□□ -2.02
PMS1-215ENST00000447232 FAM90A24PP0C7X0 464 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms